Populus trichocarpa (black cottonwood): 7490328
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Entry
7490328 CDS
T01077
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2 isoform X1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7490328
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
7490328
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
7490328
NCBI-ProteinID:
XP_002316211
UniProt:
B9HSN7
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Position
10:complement(18505017..18512189)
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AA seq
890 aa
AA seq
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MSSALGYHHHHHLQQEQQQQQQKPFSDSDSYSDSDSDTTNSQNQHSADLTNSIFKSYFEH
ANHQSLQPTQHDLTKIKSFLTSSSSGALSCLICLERIKTSDPTWSCTSLCYAVFHLICIQ
SWARQASDLSALRASTRLPISSDKAAESSTWNCPKCRSDYSRSKIPRNYLCFCGKVENPP
NDPWILSHSCGEICNRQLKNNCGHCCLLLCHPGPCPSCPKLVKATCFCGKTTDVKRCGYK
LFSCNNICKKSLDCGIHSCKQICHDGPCPPCNARGVYKCSCGRKVEERECCEREFRCENP
CEKLLACGKHVCERGCHFGECGDCPLQGKRACPCGKRLYEGMACDIVVPLCGGTCDKMLS
CGFHRCHERCHRGPCIETCRIVVTKLCRCGGMKKEVPCYQDLACERKCQRMRDCGRHACK
RRCCDGDCPPCGEICGKRLRCKNHKCPAPCHRGACSPCPVMFTISCACGETHFEVPCGTE
KDQKPPKCRKSCGISPLCRHGSDSKPHKCHYGACPPCRLLCDEEYPCSHKCKLRCHGPRP
PPNPDFTLRPKKKKPNHQSESTPGTPCPPCPELVWRPCLGQHIGAERMMVCSNRTQFSCE
NLCGSPLSCGNHYCTKTCHALKSQSSTSLVQHKRSESCEECHLPCEKERKPACRHSCPLP
CHPGDCPPCKVLVKRSCYCGSMVHVFECIYYNNLSEKEQMAARSCGGSCHRKLPNCTHLC
PKTCHPGQCPSPDKCAKKVTVRCQCQTLKKEMPCQEVQAAYHKAGSDPKDISKSHFGLGL
LPCNSGCKSKAQVVDQELHLRKSKDLEEKVPATEIHPPKRRKRREHLQETKKTSQLQKIA
ATMKWLLVIVTLMVTMVAAAYFGYKGLIWLSDWMNEVEEQQRHRRRHPRI
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgcccttggctaccaccatcaccaccacctacaacaagaacaacaacaacaa
caacagaaacccttctccgactccgattcctactccgactccgactccgacaccaccaac
agccaaaaccaacactccgcagatctcacaaactcaatcttcaaatcctacttcgaacac
gccaaccaccaatccttacaaccaacgcaacacgacctaaccaaaatcaaatccttccta
acctcctcctcctctggcgctctatcatgtctcatctgtctcgaacgcatcaaaacctcc
gatccgacctggtcttgcacttctctctgctacgccgttttccaccttatctgtatccaa
tcctgggctcgccaagcctccgatctctccgctcttcgagcctccacgcgcctccctatc
tcctctgataaagccgctgaatcctccacctggaattgccctaaatgccgctctgattat
tctagatctaaaatccccagaaattacctctgtttctgtggcaaagtcgaaaatccacca
aatgatccttggattttatcccattcttgcggtgaaatctgtaaccgtcagttgaagaat
aactgcggtcattgctgtttgttactttgccatcccggtccctgcccatcttgcccgaaa
cttgtcaaagcgacatgtttttgcggcaaaacgacggatgttaagcgttgcggttacaaa
ttattttcttgtaacaatatttgtaaaaaatcattagattgcgggattcatagctgtaaa
caaatttgtcacgatggaccctgcccgccgtgtaatgcccgcggggtttataaatgttca
tgtggaaggaaagttgaggagagggagtgttgtgagagagaatttagatgtgagaatccc
tgtgagaaattgttagcctgcggaaaacatgtgtgtgagagggggtgccattttggggag
tgtggagattgtcctcttcaagggaagagagcatgtccatgcgggaagagactctatgaa
ggaatggcttgtgatattgttgtgccgctttgtggtggtacctgtgataaaatgttgagt
tgtggtttccataggtgccacgagagatgtcatcgagggccttgcattgagacttgtcga
attgttgtcaccaagttgtgtaggtgtggggggatgaagaaagaggttccttgctatcaa
gatttggcatgtgagaggaagtgtcaaagaatgagagattgtggacgacatgcttgtaaa
cgtcgctgctgtgatggggactgtccgccatgtggagagatttgcggcaagaggcttcgg
tgtaagaatcacaagtgtcctgccccgtgtcatcgaggtgcctgttctccttgtcctgta
atgtttacaatttcatgtgcttgtggagagactcattttgaggttccctgtggcactgag
aaagaccaaaagcctccaaaatgtcgtaaatcatgtggaatatctcctttatgccgacat
ggatcagattctaagccacacaaatgccattatggggcatgccctccttgtcgattgctt
tgtgatgaagaatacccatgcagccataagtgcaaattaaggtgccacggccccagacca
cctcctaatccagatttcacattgaggccaaagaaaaagaaaccaaatcatcagagtgaa
agtacaccaggaaccccatgccctccttgccctgaacttgtttggaggccatgtcttggc
cagcacattggagcagagagaatgatggtctgctcaaacagaacccaattttcctgtgaa
aatctgtgtgggagccctctttcttgtggcaatcattattgtacaaaaacttgccatgca
ctgaagagccagtcttcaacttcattggttcaacataaaagaagcgagtcttgtgaagag
tgtcatcttccttgtgaaaaggaacggaaacctgcttgtcgacattcttgccctctacca
tgtcatcctggggactgccctccttgcaaagttcttgtgaaacgatcttgttattgtggt
tctatggtccacgtttttgagtgcatatattacaataacttgtcagaaaaggagcaaatg
gctgctcgttcatgtggtggatcttgccataggaaattgcctaattgtacacatttatgt
cccaagacatgtcatccaggtcaatgcccatcacctgacaagtgcgccaaaaaggtcact
gttcgttgtcaatgccaaaccttgaaaaaggagatgccatgtcaagaggttcaagcagcc
tatcacaaagcaggttccgatcccaaagatatatctaaaagtcattttggacttggactt
cttccttgcaattctggttgcaagagtaaagcacaggttgtggatcaggaattgcatttg
cgtaaatccaaagacctggaggagaaggttccagccactgaaattcatccaccgaagcgc
cgaaaacggcgtgaacatttacaagaaacaaagaagacctcacaactgcagaaaattgct
gccaccatgaagtggcttcttgtaatagtcacccttatggtgactatggtggcagctgca
tatttcggttacaaaggtctcatttggctctccgattggatgaatgaagttgaagagcaa
caaagacacagaagaagacatccacgaatctaa
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