Populus trichocarpa (black cottonwood): 7490468
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Entry
7490468 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7490468
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7490468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7490468
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25[C] (Qc)
Use1
7490468
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GFIT
Motif
Pfam:
Use1
GlutR_dimer
BORCS6
FapA
Motif
Other DBs
NCBI-GeneID:
7490468
NCBI-ProteinID:
XP_002324665
UniProt:
B9IN18
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Position
18:14279733..14281937
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AA seq
239 aa
AA seq
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MGISKTEINLRRLLSSAPQQQNQAKLVHYIATLREQLEQLAEERTADELPRVSKAVLNDY
SEKIEAIASKLVNSLPEIEAPQETFAGDSGKESPKADGGDQIAPSPGLRRRFAPVSNFED
KTRDSIKADASAPVKLDAAAQAHIEKHRKLQDDLTDEMVGLAQQLKESSLLMSQSLQNTE
KILDSTEQAVEQSLASTGHANVRTMDIYSKTSKTTCFTWLLMFLMTCIFIMVVLLIRVT
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcagcaaaacagaaataaacttaagaagattactctcatctgctcctcaacaa
caaaatcaagcaaaactcgtccattatattgctactttaagagagcaattggaacaattg
gctgaagagagaacggctgatgaattaccaagagtctcgaaggcggtgttgaacgattat
tcggagaagattgaggctattgcttctaaattagttaactcattgcctgaaattgaggct
ccccaggaaacttttgctggggattcgggaaaagaaagtcccaaggcagatggaggagat
cagatagcaccttctccaggcttgaggaggagatttgcgccagtgtcaaattttgaagac
aaaactcgtgactctattaaggcagatgcatcagctcctgttaaactggatgctgcagca
caagcacacattgaaaagcacagaaagcttcaagatgacttgactgatgaaatggttgga
ttggcacaacaactaaaagagagtagtctcttgatgagccagtctttacaaaacactgaa
aagatactagattctacagagcaggctgttgagcagagcttggccagcactggtcatgcc
aatgtccggaccatggacatatactcaaagacatcaaagaccacgtgcttcacatggctt
ttgatgtttctaatgacatgtattttcatcatggttgtcctcctgattcgtgtcacctga
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