Populus trichocarpa (black cottonwood): 7490502
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Entry
7490502 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7490502 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7490502
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
7490502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
7490502
NCBI-ProteinID:
XP_024445268
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All DBs
Position
18:complement(14817714..14821808)
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AA seq
824 aa
AA seq
DB search
MGSASIEQEMPAGEGIQSRFENLRGVQWRIDLGILPSPSSSSVDDVRRVTAESRRRYAGL
RRRLLVDPHLSKDGRSSPDPVIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHGS
YFQTPGCQGMLRRILLLWCLRHPEYGYRQGMHELLAPFLYVLHIDAEHLSEVRKQYEDHF
TDKFDGLAFQENDLTYNFDFKKFLDSMEDEIGSHGNAVKVKSLNELDPEIQTTVLLTDAY
GAEGELGIVISEKFMEHDAYCMFDALMSGSHGSVAVVDFYSHSPAHGSHSGLPPVIEASA
ALYHLLSVVDSSLHSHLVELGVEPQYFALRWLRVLFGREFSLENLLLIWDEIFAADNNVI
LEKGAEDDADSGFRIFISPRGALIPAMSVSMILHLRSSLLATEHATTCLQRLLNFPENID
LRKLINKAKSLQSLALDTNMSSVSPPFDGIYNHSKSMVVRGHTHALSSGSVSPKTPLNAV
PDSYWEEKWRDLHKTEELKHDHLGKLKPSQKKRWTEKVRLPLSRTESAPAPVKAGSGKKD
QKSSIKRSLLEDLSHELGMDGDIGKSDCHEVSGKKDHQTAEVEGGGPDSVNNDFTCSTEE
RCLSGNSGSEENSSVFSDPSSSLSGGNEHENDSEKSSVASNMSVDENDDQPEALQEDPTL
PVSHPPEGVSLNSGTNNEPAGKQVAGPKERKLSGKFQWFWKFGRNTAGEETSEKGSGTFE
ATKPVNDASNQINSIGSSSVNGSCNSYASSKGESVDQNVMGTLRNFGQSMLEHIQIIESV
FQQDRGQVGSLENFSKTALVGKGQVTAMTALKELRKISNLLSEM
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagcttcaattgagcaggaaatgccagcaggagaggggattcagagtcgtttt
gagaatttaagaggggttcaatggaggatagatcttggaattttgccttctccttcatct
tctagtgttgatgatgttcgtagagttactgctgaatctagaagaaggtatgctggttta
agaaggcggctcttagttgatccacatttgtcaaaggatggaaggagttcacctgatcct
gtaattgacaatccactgtcacaaaacccagatagcacctggggtcgcttctttcggaat
gctgaactggaaaaaacacttgaccaggatttgtcacgtttatatccagaacatggtagc
tatttccagacacctggctgccaaggaatgttaagacgaatcttgttattgtggtgcctt
agacatccagagtatggttatcgacaaggaatgcatgaactcttggcgccttttctatat
gttcttcacattgatgcggagcatctgtctgaagtgcgcaagcagtatgaagaccatttc
acagacaaatttgatggtttagcatttcaggaaaatgatcttacatacaactttgatttt
aaaaagtttttggattccatggaggatgaaattggctcccatggtaatgctgtcaaagtc
aagtctctcaatgagcttgatcctgagatacagacaactgtattactaacggatgcttac
ggggctgaaggtgaattgggtattgtcatatcagagaaatttatggaacacgatgcttac
tgtatgtttgatgcattgatgagtgggtctcatggttcagttgccgttgtggacttctac
tctcactcccctgcacatggttctcattctggcttaccccctgtcattgaagcttctgct
gctttgtaccatttactgtctgttgttgattcatctttacacagccaccttgttgagctg
ggtgttgaacctcagtattttgcacttcgctggttacgggttttatttggacgagaattt
tcactcgaaaacctcttgttaatatgggatgaaatatttgcagcagataataatgtcata
ttagaaaaaggtgctgaagatgatgcagactctggttttcgtatctttatatcacctcgg
ggagcattaataccagctatgtctgtttctatgattcttcatttgaggtcttccctgctt
gccactgagcacgcaactacttgtctccagagactcttgaattttcctgagaatatagat
ctgagaaaactgataaacaaggcaaagtctttacagtccctcgcactggatactaatatg
tcctctgtgtctcctccatttgatgggatttataaccacagtaaatcaatggtggtgaga
ggtcatactcatgcactttcatctggttctgtttcccccaaaactcctctaaatgcagtg
cctgatagttattgggaggagaaatggagagatttgcacaagacagaagaactcaagcat
gatcatttagggaaattgaaaccaagccagaaaaaacggtggacagaaaaagtaagattg
cccctatctaggacagaatctgcaccagctccagtaaaagcagggagtgggaagaaggat
cagaagtcatctattaagcgtagtttgttagaagatttatcacatgaacttgggatggat
ggagatattggaaaatcagattgccatgaagtttcaggcaagaaggaccatcaaactgca
gaagttgagggagggggaccagacagtgttaacaatgacttcacttgctcaactgaggag
agatgtcttagtggaaattctgggagtgaggaaaattcatctgtgttttcggacccatct
agttctcttagtggtggtaatgagcatgaaaatgactctgagaaaagtagcgttgcctcg
aatatgtctgtcgatgaaaatgatgatcaacctgaggctctccaggaagatccaaccctt
cctgtttcccatccccctgaaggtgtgtctctaaattctgggaccaacaatgagcctgct
ggaaaacaggttgcaggtcctaaggagaggaaactttcaggtaaatttcaatggttttgg
aagtttggacggaatactgctggtgaggagacttctgaaaagggaagcggcacatttgag
gctacaaaacctgtcaacgatgccagtaatcagattaattcaataggatcttcgtctgtc
aatggatcttgcaactcttatgccagtagcaaaggagagagcgtggatcagaatgtgatg
ggtactttgaggaactttggacagtccatgcttgaacatattcagataatcgagtctgtt
ttccagcaagataggggtcaggtgggttcattagagaatttctccaaaactgctcttgtt
ggcaaaggacaagtcacagccatgacagctcttaaagagcttcggaaaatcagcaatctc
ttatctgagatgtga
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