Populus trichocarpa (black cottonwood): 7490523
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Entry
7490523 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit A-3
KO
K08064
nuclear transcription factor Y, alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7490523
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
7490523
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
PBP_like
Motif
Other DBs
NCBI-GeneID:
7490523
NCBI-ProteinID:
XP_002324716
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Position
18:7721663..7727290
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AA seq
337 aa
AA seq
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MALRIQNLLKKNFDEPYFTVSCPSWWNSNEQQFLPSLSKNTSFKVDSPNQPYHESKQLGF
HLLDQESSSTLSIGQSHNEMSSVGGINSQDQCISSESDESCGKGVKGKMKPVLLLSTPDS
VSNHSQADCSYSMVRAPYADPYFGGLCNPYELHAFIQPHLGSHMVGMTAGRVPLPVDLAD
DGPIYVNAKQYRGIIRRRQSRAKLEAQNKLVKNRKPYLHESRHIHALNRVRGSGGRFLSK
KKLQESDPTPSQCNVTDTIHSHVKNDASELESYQSGTGQSGASNTTCSDITSVSYSNVTF
RQPERRFSGIATHLGGGMEINSRLICRGTQHHTSVVQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctttacgaattcagaacttgctgaagaaaaactttgatgaaccttacttcactgtt
agttgcccatcatggtggaattcaaatgaacagcaatttttgccatctttatccaagaac
acaagctttaaagtagactctccaaaccaaccttatcatgaatcaaagcagttaggattt
catctcctggaccaggaatcatcctcaactctatcaattggtcaatctcacaatgaaatg
agttctgtgggagggatcaattcacaagatcagtgtatttcatctgaatctgatgaaagt
tgtgggaagggcgtgaagggaaaaatgaagccagttctcttgttgagtactccagatagc
gtgtctaatcactcacaagctgattgtagctattcaatggttcgtgctccatatgctgat
ccttactttggtgggctgtgtaatccatatgaacttcatgcttttattcagccccatctg
ggttctcatatggtggggatgacagctggacgagtcccactccctgttgatcttgcagat
gatggaccaatttatgttaatgctaaacagtaccgtggaattatcagaaggagacaatca
cgggcaaagcttgaggctcaaaacaaactggtaaaaaatcgaaagccataccttcacgag
tctcggcacattcatgccttgaatagggttcgaggatctggtggacgctttctcagcaaa
aaaaagctccaggaatctgatcccactcctagtcagtgtaatgtcacagataccatccac
tcacacgtaaagaatgatgcatcagaactagaaagctatcagtctggaaccggacaatct
ggtgcctcaaatactacctgctctgacatcaccagtgtctcctacagcaatgtcactttt
aggcagccagaacgccggttctcaggtattgctactcaccttggtggaggcatggaaatc
aacagtaggcttatttgcagaggaacccaacaccacacttccgttgttcagtga
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