Populus trichocarpa (black cottonwood): 7490527
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Entry
7490527 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7490527
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7490527
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
7490527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
7490527
NCBI-ProteinID:
XP_024446455
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All DBs
Position
18:7658442..7661846
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AA seq
483 aa
AA seq
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MESLEGKVQFTSLSKEKNTYLNVNEDCNDPFLWPVPKGVNNNNNNNQIVAKSSSIGDYVA
FEFPQDYIGDSSYDSCASANFNAPPEVEVNLKNVFGGIVAILTGRNKDSSSSSVSVNKQQ
PGSDVSFLGSEKNGDTYLHSSVYIPSAPPEPNGFNYAVYKAVLEAEPPEWLPDSSTTVCM
QCTSPFTVVTRGRHHCRFCGGVFCRTCTKGRCLLPAKFRERNPQRVCDACYDRLDPLQGV
LICTISNAMQVAKHDVMDWTCMRGWLNLPVGLSMEHEIYKASNTLRSYWQVSTLNPEKSI
PLAVMKGAKGLAILTVVKAGAVVAYKFGTGLVIARRSDGSWSAPSAICSIGLGWGAQIGG
ELMDYIIVLHDFKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDRGAGMCYTYSC
SKGAFVGVSLEGNIVATRMDTNLKFYGDPYLTTADILLGTVDRPKAAEPLYAALRELYSS
LLH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcttgaaggaaaagtacaatttacatccctttcgaaagagaagaatacgtac
ctcaatgttaatgaggactgtaacgatccctttttatggcctgtgcccaagggtgtgaac
aacaacaacaacaataatcagatagttgctaaatcctcctcgattggagattatgtcgct
ttcgagtttccccaagattacattggtgattctagttatgatagttgtgcttccgccaac
ttcaatgctcctccggaggtggaggtcaacttgaaaaacgtgtttggtgggatcgttgcg
attttaactgggcggaataaagactctagtagcagtagtgtttctgtaaataaacagcag
cccggttcagatgtttcgtttctgggctcggagaagaatggggacacatatttgcactct
tcggtttatattccgagtgcgccgcccgagccgaatgggttcaattatgctgtgtataaa
gcggtgttggaagctgaaccacctgagtggttgccggatagttctactacagtttgtatg
cagtgtacttctccctttacagtggttactcgtggaaggcatcattgtcgtttttgtggt
ggagttttttgcagaacatgtactaaaggacggtgtttgttaccggctaagtttagggag
aggaacccccagagggtttgtgatgcctgctatgacaggctcgatcctttacaaggagtt
cttatttgtaccattagcaatgctatgcaagtggcgaaacatgatgtaatggattggaca
tgcatgagaggatggttgaacctgccagttggtttgtcaatggaacatgagatatataaa
gcatccaatacattgagaagctattggcaggtatctacgctgaatcctgagaagtccata
cccctagcagttatgaaaggagccaaaggcttggcaatcttaacagttgtcaaagctggt
gcagtagttgcttacaaatttggaactggtttagtcattgctcggagatcagatggatca
tggtctgccccttcagcaatatgctcaattggtttaggatggggcgctcagattggaggt
gagctaatggactacataattgtgctccatgatttcaaagccgtgaaaacgttttgtagt
cgcatgcatttttctcttggagctggttgcagtgctgcagcaggccctgttgggagggtg
ctggaagcagatcttcgtgctggggatagaggagctggcatgtgctatacttatagctgt
agcaaaggggcatttgtgggagtgtcgctagaaggaaacattgtagcaacgaggatggat
accaatctaaagttttatggtgatccttatctcacaactgctgacattcttcttgggact
gtggatagacctaaagctgcagaacccctatacgctgctctcagagaactgtactcaagt
ctactgcattag
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