Populus trichocarpa (black cottonwood): 7490677
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Entry
7490677 CDS
T01077
Name
(RefSeq) protein SHI RELATED SEQUENCE 5
KO
K27807
short internodes/stylish family transcription factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7490677
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
7490677
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Gene cluster
GFIT
Motif
Pfam:
DUF702
TFIIA
DUF7500
Motif
Other DBs
NCBI-GeneID:
7490677
NCBI-ProteinID:
XP_024450682
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Position
2:1915570..1918001
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AA seq
318 aa
AA seq
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MAGWFYLGEREGPSSKQDQEKEVNNSSLFLYRSSNEEIYNNNKGFELWPQYYPQQQNMNS
FSFGVGPSRRNFSDDHSPRSGFTVMRQGGGLGGGMNCQDCGNQAKKDCPHSRCRTCCKSR
GFQCQTHVKSTWVPAAKRRERQQQLAALQQQNQEQQQQQQQQQQFRGENPKRQRENQGGA
SSLACTRLATTTSGLEMTAFPPEVNSQAVFRCVKVSALDDAEDQLAYQTAVNIGGHVFRG
ILYDQGPDGRYTSTGGESSSSGAQQLGLITAATTSTTATTTNTGNPAAGNTLFDPSSLYP
APLNAFIAGTQFFPPPRS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtggttctatctaggtgagagagaagggccatcaagcaaacaagatcaagag
aaagaagtcaataatagtagtttgtttttgtacagatcatcaaacgaggagatctacaac
aacaacaaggggtttgagttatggccgcagtattatccccagcagcaaaacatgaacagc
ttctcgtttggagtgggtcctagtcgaagaaatttctctgatgatcactctccaagatca
ggttttacagtgatgagacaaggaggaggcttagggggaggaatgaactgtcaagactgc
gggaaccaagctaaaaaagactgtccccattcgagatgtagaacttgttgtaagagtcga
gggtttcagtgccaaacacacgttaagagcacttgggtccctgctgctaaaaggagagaa
aggcagcaacaactagctgctttgcaacaacaaaatcaagaacagcaacagcaacagcaa
cagcaacaacagtttcgaggagagaatccaaaaaggcagagagagaatcaaggtggtgct
tcctctcttgcttgcactcgtttagccactaccacgtcagggcttgaaatgacagcattt
ccaccagaagtgaattcacaagccgtatttcgttgcgttaaagtaagcgccctggacgat
gcagaagatcagttagcatatcaaacggcagttaacattggaggccatgttttcagagga
attctctacgatcaaggtcctgacgggcgttacaccagtacaggtggtgagagctcatcc
agtggagcacaacaacttggtcttataacagcagcaacaactagcaccacagcaactaca
acaaacactggtaatccagctgctggcaatactttgtttgatccgtcttctctatatcca
gctcctctcaatgcttttattgctggtacgcaattcttcccacccccaaggtcctag
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