Populus trichocarpa (black cottonwood): 7490760
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Entry
7490760 CDS
T01077
Name
(RefSeq) primase homolog protein isoform X1
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pop03029
]
7490760
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
7490760
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
7490760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
Toprim_2
Toprim
Toprim_3
Helic-prim_T7_N
Motif
Other DBs
NCBI-GeneID:
7490760
NCBI-ProteinID:
XP_024455891
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Position
1:48664170..48669221
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AA seq
387 aa
AA seq
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MATSALSLTNQLCRFSSEVHFLFINKNFSTPKSTRLISHVWSYSKTTRIPALHSANGYIK
EAIEEGEGMVDSDKVRVLKQKIEVLGIKCDDSCFPGQYYHLLCPKCKGGKTMERSLSFNI
TQDVDVAMWRCFGTSCGWTGQAFADSRMPIAGVNKIFKVKSSKQVTPENVVLEPLGDKLI
AYFSERMISEETLRRNAVMQMSGDKYIIAFTYRQNGAIVGCKYRTMEKRFWQEKDTRKWL
YGLDDINEATEIIIVEGEIDKLSVEEAGFRNCVSVPGGAPQIVSAKDLPSIQKDRAYQYL
WNSKEYLDKLSRIVLATDGDTSGRSLAEELARRLGKERCWVVRWPEKDDSRCFKDANEVL
KCLGPAALKGVIQTAEKYEACQLHRLN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcagctctcagtctcactaatcagttatgtcgcttctcttctgaagtacac
ttcttgttcataaacaagaatttctcaacaccaaaatcaacaagattaattagtcatgtt
tggtcttactctaaaactaccaggattccagctttacactcagctaatggttatataaag
gaggctatagaagagggggagggtatggttgatagtgataaagtaagggtgttaaagcag
aaaatagaggttcttgggattaaatgtgatgattcttgctttcctggacagtactatcac
ttgctttgtcccaagtgcaaaggtggcaagaccatggagaggagcttatcatttaatatc
acccaagatgtggatgttgcaatgtggagatgtttcgggactagttgtggatggacaggc
caggcctttgctgatagcaggatgccaatcgctggagtgaacaaaattttcaaagttaag
tcctccaagcaagtaaccccagagaacgtagttttggaaccattgggtgacaagctgatt
gcatactttagtgaaagaatgatttctgaggaaactctgcggagaaatgcagttatgcag
atgtccggtgataagtatattattgcttttacatacagacaaaatggggcgattgttggt
tgcaaataccgaaccatggagaaaaggttttggcaggagaaggacacaagaaaatggtta
tatggactagatgacataaatgaagccaccgaaattattattgttgaaggggaaatagat
aagctttcagtggaggaagctggcttccgtaattgtgttagtgttcctggtggcgcacca
caaatagtttctgcgaaagatttaccatccatacagaaggacagagcgtatcagtatcta
tggaacagcaaagagtacttggataaactatctcgcattgtcctggcaactgatggcgac
acaagtgggcgatcgttggctgaagagttagcacgccggctgggaaaagaaagatgttgg
gtggtacgttggccggagaaagatgactcacggtgcttcaaagatgcaaatgaggttctg
aagtgtttgggaccagctgctttgaagggagtaattcaaaccgcagaaaaatatgaggct
tgtcagctacatcgtctgaattag
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