Populus trichocarpa (black cottonwood): 7490969
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Entry
7490969 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7490969 isoform X1
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7490969
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
7490969
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_RFWD3
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
eIF2A
Beta-prop_IP5PC_F
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
7490969
NCBI-ProteinID:
XP_002298116
UniProt:
B9GKZ1
LinkDB
All DBs
Position
1:14998702..15003266
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AA seq
350 aa
AA seq
DB search
MDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGH
KGAVWSCCLDTNALRAASGSADFSAKLWDALTGDELQSFEHKHIVRACAFSEDTHLLLTG
GFEKILRIFDLNRPDAPPREVDNSPGSIRTVAWLHSDQTILSSCADIGGVRLWDIRSGKI
VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNVESASLEPKFG
NKFVAGGEDMWIHVFDFHTGEQIGCNKGHHGPVHCLRFSPGGESYASGSEDGTIRIWQLS
PASHDENDSLPGNGPTGKVKVSADDVAQKIEVLRISKEGKTAEKDKATDA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaagaaggtggctgtgccattagtgtgccatggacattcacgtcctgttgtg
gatttgttttacagtcctgtcactcctgatggcttctttctcattagtgctagcaaggat
tcgagtcccatgttgagaaatggggagactggtgattggattggaacctttgaagggcac
aaaggtgcagtgtggagttgctgcctggacactaatgctttgcgtgcagcatctggctcc
gctgatttttctgcgaaattgtgggatgcattgacaggggatgaattacagtcttttgag
cataagcatattgttcgagcatgcgcattttcagaggatactcaccttctacttactggt
ggatttgagaaaattcttcgtatatttgacttgaatcgtccagatgcacccccaagagaa
gttgacaattcaccaggttcaatcagaactgttgcgtggcttcacagtgatcagaccata
ttaagttcttgtgctgatattggtggtgtgaggttatgggacatacgaagtggcaaaatt
gttcaaacacttgaaacaaagtcacctgtaacaagtgctgaagtgagtcaggatggtcgt
tatataactactgctgatggatctacggttaaattttgggatgcaaatcattttggattg
gtgaaaagctatgacatgccatgcaatgtggaatcagcttcattggaaccaaaatttggt
aataagtttgttgctggaggagaagacatgtggatccatgtgtttgatttccatactgga
gaacagattggatgcaacaagggtcaccatggtcctgttcattgcctacgattctcacct
ggaggagagtcttatgcatcaggatccgaagatggaaccatcagaatatggcaactcagc
ccagcaagtcatgatgagaatgattctcttcctgggaatggaccaactgggaaagtgaag
gtttcagctgatgatgttgctcaaaagatcgaggtcttgcgtatcagcaaagaaggaaaa
actgctgagaaggataaggcaactgatgcctga
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