KEGG   Populus trichocarpa (black cottonwood): 7490987
Entry
7490987           CDS       T01077                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    7490987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7490987
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     7490987
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 7490987
NCBI-ProteinID: XP_024462965
LinkDB
Position
1:complement(15553725..15557164)
AA seq 357 aa
MSDSKRSGGGGSSKKRNLPSWMSSKDNENKSHGKKAAATSAEDEQSKLLDGVVFVLSGFV
NPERATLRSQALEMGAEYRPDWTSDCTLLVCAYSNTPKFRQVEADCGTIVKKEWILECYS
QKKLVEIDSYLMHAGKPWRKSNISHERGSDQKASPPRKSDKQVKSGLHSKPTASTSYKVR
ASNPSKECFSPSKVKEWVIDDLNRTISWLESQEEKPEPSEIKQIAAEGILICLQDAIDFL
EQNQDVRKITDQWNVVPHAVEEMVKLVDGGNASSSLSKEDLCRKAKACKEIYEAELSSLD
GSKSKKQRLKSDESGSSKRTNTVTGDAAEYDSDETIEMTKEEVDMAYNTVASKFLND
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgtcggattcaaagagaagtggtggagggggtagtagtaaaaagcgaaatcttccttca
tggatgagttccaaagacaatgagaataaatctcatgggaagaaggcagcagcaacttct
gccgaagacgaacaatctaaacttctggacggtgtggtgtttgtattgtccggctttgtt
aatcctgagcgtgctacattgcggtcccaggctttagaaatgggagcggagtatcgacca
gactggacctcagattgcactctcttggtttgtgcttattcaaatactccaaagtttcga
caagttgaggcggattgtggaaccattgttaagaaggaatggatactagagtgttacagc
caaaagaagctagttgaaattgatagttatcttatgcatgctgggaaaccttggcggaaa
tccaatatttctcacgaaagaggcagtgatcaaaaggcatccccacctagaaaatctgac
aaacaggtcaaaagcgggttgcattcgaagccaactgcctctacatcctacaaggttaga
gcatctaatccctctaaagagtgcttctctccttctaaagtgaaggagtgggttattgac
gatttgaatagaaccatctcatggctggagagtcaagaggaaaagccagagccaagcgag
attaaacaaatagctgcagaaggcatcttaatttgcttacaagatgccatagatttcctt
gaacaaaatcaggatgtccggaaaataacagatcagtggaatgttgtccctcacgcagtt
gaggagatggtaaagcttgtagatggtggaaatgcttcatcttctctttcaaaggaagat
ctttgcaggaaggcgaaggcatgtaaagaaatctatgaagcagaactgagcagtttagat
ggttcaaagagtaagaaacaaaggttgaaaagtgatgaaagtgggagtagtaaaaggaca
aacaccgtcactggtgatgcagcagagtatgacagcgatgaaacaattgaaatgacaaag
gaggaagttgacatggcgtacaatactgttgcttctaaatttttaaatgattag

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