Populus trichocarpa (black cottonwood): 7491044
Help
Entry
7491044 CDS
T01077
Name
(RefSeq) tubulin alpha-5 chain
KO
K07374
tubulin alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04145
Phagosome
pop04517
IgSF CAM signaling
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
7491044
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7491044
09142 Cell motility
04814 Motor proteins
7491044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7491044
03036 Chromosome and associated proteins [BR:
pop03036
]
7491044
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7491044
04147 Exosome [BR:
pop04147
]
7491044
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
7491044
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
7491044
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
7491044
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7491044
Exosomal proteins of other body fluids (saliva and urine)
7491044
Exosomal proteins of colorectal cancer cells
7491044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
7491044
NCBI-ProteinID:
XP_002325422
UniProt:
B9IPR1
LinkDB
All DBs
Position
19:4880711..4884283
Genome browser
AA seq
449 aa
AA seq
DB search
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSIGAEHDSFNTFFSETGSGK
HVPRAIFVDLEPSVIDEVRSGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD
RVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNSAVSTIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGDDEGEDEDY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggagataataagcatacatattggacaagcagggattcaggttgggaattcttgt
tgggaactttattgtcttgaacatggaatacagcctgatggaacgatgcctagtgacacc
tcaatcggagcggaacatgattcttttaataccttcttcagcgaaactggttcaggaaag
catgtgccgagagctatatttgttgatctcgaaccctctgtcattgatgaagtcagaagt
gggacttacagacagctttttcaccctgaacaacttatttctggcaaggaagacgctgct
aataactttgccaggggacattatacagtgggaagggaaattgttgatctatgcctggac
cgcgtgaggaaattggcagacaattgcactggtttgcaagggtttttggtatttagtgct
gttggtggtggcactggttctggtttgggctcgctgcttttggaacgattgtctgtggat
tatggaaagaagtcaaaacttggcttcaccatctatccttctcctcaggtttctactgct
gtcgtggaaccttacaacagtgttctctccactcactctctccttgaacacacagatgtt
gctgtgcttttggacaatgaagctatttatgacatctgcaggagatctttagacattgaa
agaccaacatacaccaatttgaaccgtttgatttcccaaattatctcatctttgacaact
tccttgaggtttgatggggccattaatgtggacatcacagagtttcaaactaatctcgtt
ccatatcctcgcatccatttcatgctttcatcttatgctccagtaatctcagctgccaag
gcttaccatgagcagatttcagttcctgagatcacaagtgctgtgtttgaaccctcaagt
atgatggctaaatgtgatccaaggcatggaaaatacatggcttgctgtctcatgtatcgt
ggagatgttgtaccaaaggatgttaattctgccgtttccaccattaagacaaagaggaca
gttcaatttgttgactggtgcccaactggtttcaagtgcggtataaactaccaaccacca
acagtggtacctggaggtgatcttgctaaagtgcagcgtgcagtttgcatgataagcaac
aacacagcagtagctgaggtcttctccagaattgaccacaagtttgatctcatgtactct
aagcgagcatttgtccactggtatgtgggcgaaggcatggaggaaggtgaattctcagaa
gctcgtgaagatcttgctgcccttgagaaagactacgaggaagtcggagcagaaggtggt
gatgacgagggtgaggacgaagattactga
DBGET
integrated database retrieval system