KEGG   Populus trichocarpa (black cottonwood): 7491044
Entry
7491044           CDS       T01077                                 
Name
(RefSeq) tubulin alpha-5 chain
  KO
K07374  tubulin alpha
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04145  Phagosome
pop04517  IgSF CAM signaling
pop04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    7491044
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    7491044
  09142 Cell motility
   04814 Motor proteins
    7491044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7491044
   03036 Chromosome and associated proteins [BR:pop03036]
    7491044
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    7491044
   04147 Exosome [BR:pop04147]
    7491044
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     7491044
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     7491044
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    7491044
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7491044
  Exosomal proteins of other body fluids (saliva and urine)
   7491044
  Exosomal proteins of colorectal cancer cells
   7491044
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 7491044
NCBI-ProteinID: XP_002325422
UniProt: B9IPR1
LinkDB
Position
19:4880711..4884283
AA seq 449 aa
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSIGAEHDSFNTFFSETGSGK
HVPRAIFVDLEPSVIDEVRSGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD
RVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNSAVSTIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGDDEGEDEDY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagggagataataagcatacatattggacaagcagggattcaggttgggaattcttgt
tgggaactttattgtcttgaacatggaatacagcctgatggaacgatgcctagtgacacc
tcaatcggagcggaacatgattcttttaataccttcttcagcgaaactggttcaggaaag
catgtgccgagagctatatttgttgatctcgaaccctctgtcattgatgaagtcagaagt
gggacttacagacagctttttcaccctgaacaacttatttctggcaaggaagacgctgct
aataactttgccaggggacattatacagtgggaagggaaattgttgatctatgcctggac
cgcgtgaggaaattggcagacaattgcactggtttgcaagggtttttggtatttagtgct
gttggtggtggcactggttctggtttgggctcgctgcttttggaacgattgtctgtggat
tatggaaagaagtcaaaacttggcttcaccatctatccttctcctcaggtttctactgct
gtcgtggaaccttacaacagtgttctctccactcactctctccttgaacacacagatgtt
gctgtgcttttggacaatgaagctatttatgacatctgcaggagatctttagacattgaa
agaccaacatacaccaatttgaaccgtttgatttcccaaattatctcatctttgacaact
tccttgaggtttgatggggccattaatgtggacatcacagagtttcaaactaatctcgtt
ccatatcctcgcatccatttcatgctttcatcttatgctccagtaatctcagctgccaag
gcttaccatgagcagatttcagttcctgagatcacaagtgctgtgtttgaaccctcaagt
atgatggctaaatgtgatccaaggcatggaaaatacatggcttgctgtctcatgtatcgt
ggagatgttgtaccaaaggatgttaattctgccgtttccaccattaagacaaagaggaca
gttcaatttgttgactggtgcccaactggtttcaagtgcggtataaactaccaaccacca
acagtggtacctggaggtgatcttgctaaagtgcagcgtgcagtttgcatgataagcaac
aacacagcagtagctgaggtcttctccagaattgaccacaagtttgatctcatgtactct
aagcgagcatttgtccactggtatgtgggcgaaggcatggaggaaggtgaattctcagaa
gctcgtgaagatcttgctgcccttgagaaagactacgaggaagtcggagcagaaggtggt
gatgacgagggtgaggacgaagattactga

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