Populus trichocarpa (black cottonwood): 7491065
Help
Entry
7491065 CDS
T01077
Name
(RefSeq) cation/calcium exchanger 1
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7491065
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
7491065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
7491065
NCBI-ProteinID:
XP_024446945
LinkDB
All DBs
Position
19:5549476..5551796
Genome browser
AA seq
584 aa
AA seq
DB search
MASFSTSRAKSKTIILFLNITFLFLFFFYLSTSYFIDQSTEPKVTANHSLVLQESIKTDG
CSGIHDYIDYRSKCIYVKSHIGCRPKGYINYLQIFYCTCGQFSILGYIMLLLWLAVLFYL
LGNTAADYFCPALESLSKLLKLSPTIAGVTLLSLGNGAPDVFASIVSFTRSSNGGVGLNS
ILGGAFFVSSVVVGVISLLSGPREIYVDKSSFIRDVCFFLFSLCSLLLIIIVGKISLWGA
ISFLSIYLGYVGVVCIMHFDRYRKENRLTVDGNQEEDFLERGIPLLGYVDHEKPILVDKT
TADDQRSSLIFCNLNSPFFYYLGSLLYVLELPLSLPRRLTIPVVSEARWSRPFAVISVAL
APILLAALCTSQKEKEFGSRSSLVAYVIAVLIGMVLCNLACVTTTKCSPPKKSLFPWLAG
GFLMSVTWTYIIAEELVSLLISLGYVLGINPSVLGLTVLAWGNSLGDLIANVAMAMTGGA
DGAQIAISGCYAGPMFNTLLGLGISLVISSGSKYPSSFVVPEDPSLYETIGFLMGGLLWA
LVILPRKDMRLDKSLGIGLLAIYLCFLSLTLARSLGLLKLHGFS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttcagcacctcaagagccaagtccaagacgatcattcttttccttaacatc
acctttctcttcctcttctttttctatctttcaacctcatattttatcgatcaatccact
gaaccaaaagtcactgcaaaccattctttagtgcttcaagaatcgatcaaaaccgatggc
tgcagcggaattcatgactacatagattacaggtccaagtgtatttatgtcaagtctcat
attggatgcaggcccaaagggtatataaactatcttcaaatcttttactgtacttgtggc
caattttccatccttggctatattatgttgttactgtggctggctgttctgttctatctg
ttaggcaatacagcagcagattacttctgtcccgccttagaaagcttgtccaaactcttg
aagctttctccaactattgctggtgtcacccttctttcacttggcaatggcgctccggat
gtttttgctagtattgtttccttcactaggtctagcaatggtggagttggcctgaatagt
attttgggtggcgctttttttgtgtctagtgtggtggttggtgttataagtttattatct
ggtcctcgagagatttatgttgacaagtctagcttcattagagatgtctgcttctttctg
ttctctctctgttctcttctcttgattattattgtggggaaaatatccttgtggggtgcc
atttcttttctttctatctacttgggttatgtcggtgtggtttgcatcatgcactttgat
cggtaccgaaaagagaatcgtttaactgtagatggcaaccaggaggaggattttttggag
aggggtatacctttacttggttatgttgatcatgaaaaaccaattttggtggacaaaacc
actgctgatgatcagcgaagttcattgattttttgtaatctcaattctccctttttttat
tacctgggtagccttctgtatgttttggagttacctctgtccttgccaagaagattgact
atacctgtggttagtgaggcgaggtggtctaggccatttgcagtaatttctgtggcgttg
gcaccaattttattggctgcactatgcacctcccaaaaggaaaaggagtttggttcaaga
agcagcctagtagcttatgtgatagcagtattgattgggatggttctctgcaatcttgca
tgcgtgacaacaacgaagtgtagcccaccaaagaagtccttgttcccttggcttgctggt
gggtttttgatgagtgtaacttggacatatattatcgctgaggaattggtctctttattg
atttcactaggctatgtactcgggattaacccttcagttctcggattaactgtcctggct
tggggcaactcactcggagatttgatagctaatgttgccatggcgatgactggtggggca
gacggtgcccaaattgcaatatcaggctgctatgctggtcccatgttcaacacattgctg
ggtttgggcatttcactagtcatctcatcagggtccaaatatccatcttcatttgtcgtc
cctgaagacccttctctctatgagactatagggtttttgatgggaggcttgctctgggcc
cttgtgatcttgccgaggaaggacatgaggttagataagtctcttgggattggtctctta
gctatatatctctgttttctgtctctgacgctggccaggtctcttggtctcttgaaactt
catgggttttcttag
DBGET
integrated database retrieval system
