Populus trichocarpa (black cottonwood): 7491110
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Entry
7491110 CDS
T01077
Name
(RefSeq) transcription factor GAMYB
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7491110
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7491110
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
HTH_Hrp3
DUF4081
Motif
Other DBs
NCBI-GeneID:
7491110
NCBI-ProteinID:
XP_002313492
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Position
9:complement(3089704..3094751)
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AA seq
516 aa
AA seq
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MSSMMNGSEDSKRSKDCRDSPAADEANGGEMMGGMIPLKKGPWTSAEDAILIDYVKKHGE
GNWNAVQKHSGLFRCGKSCRLRWANHLRPDLKKGAFTPEEENRIIELHATMGNKWARMAA
ELPGRTDNEIKNYWNTRIKRLQRTGLPIYPPDVCLQLYKTIQDGQNMGTLQTGDTCDPDL
MQTDHFKIPEVEFKNLELSQDVLSYSSVLFDTSPSSMLKQGVGSSYGNALVFPTIHPAKR
LRESQTIFTGLDGCVGRGMPVFDQLTDYPCGKIIEHSGLSSPYDPDLSTYDQPSWDVLPG
SHAILNDNSSSSNVPICGTMKLELPSLQYSESQQDSWGTPTSPLPSLESVDTLIQSPPTK
EMRSDGQSPRSSGLLEAVLYEYRTLKNSKKCSGHPTSDVSVVFGGVNVSPLNTSATEWEV
YADLNSPSGHSASSLFSECTPVSGSSPDGRAYNVEPEPVDQDLIPYVEARKAPNQTDCNR
PDVLLGSAWFAPSNNCHKDQFFQTDDVVAVLGGDQP
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatgatgaatgggagcgaggacagtaagagatccaaggattgtcgagattca
cctgcagctgatgaagctaatggtggggagatgatgggtggaatgatccctttgaaaaaa
ggcccgtggacctctgcagaagatgctattttgatagactatgtcaagaagcatggagag
gggaattggaatgctgtccagaagcactcagggctcttccgatgtggaaaaagctgccgt
ctgcgatgggcgaatcatctacgaccggatctgaagaagggcgcgttcactccagaggaa
gagaaccgcatcattgaactccatgctacaatgggaaataaatgggctcgaatggctgca
gagttgcctggacggacagataatgagataaagaactactggaatactagaataaagaga
ctgcaacgtactggcttgccaatttatcctcctgatgtttgtctgcaattatacaagacg
attcaagatggtcaaaatatgggcacattgcaaacaggggacacatgtgatcctgatctg
atgcagactgaccattttaagattccagaagtggaattcaaaaacctggaactcagtcaa
gatgtcctatcttattcatcggttctttttgatacttctccaagcagcatgctgaaacaa
ggtgtaggttcttcctatggtaatgctcttgtgttcccaacaattcatcctgccaaacgc
cttagagagtcacagaccatattcactggtcttgatggttgtgtcggcaggggaatgcca
gtgttcgatcaattgacagattatccttgtggaaagattatagagcactctgggttatct
tccccctatgatcctgatttgagcacctatgaccagccatcatgggatgttcttcctggc
agtcatgccatattaaatgacaactcttcttcttctaacgtgcccatatgtgggaccatg
aagttagagctcccttcactccaatattcagaatctcaacaagatagttggggcacacca
acttccccgctgccttcgcttgagtctgttgatactttaattcagtctcctccaaccaag
gagatgcggtcagatggtcagtcacctagaagtagtggtctcttggaggcagtactttat
gaatatcgaactctgaaaaactcaaagaaatgttctggccacccaacttcagatgtttct
gtcgtgtttggtggagtaaatgtttcacccttgaatacctctgcaacagaatgggaagta
tatgctgatcttaactctccctcaggtcattcagcttcgtcattatttagcgagtgtact
cctgtcagtggaagctccccagatggacgagcatataatgttgagcccgagccagttgat
caggatttgatcccatatgttgaggcgagaaaagctcccaatcagacagattgcaacagg
ccagatgttttgcttggctcagcctggtttgcgcctagcaataactgccacaaggaccag
ttttttcagactgatgatgtggtggcggttcttggtggagatcaaccatga
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