Populus trichocarpa (black cottonwood): 7491142
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Entry
7491142 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: auxin response factor 4
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7491142
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
7491142
NCBI-ProteinID:
XP_024464633
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Position
9:complement(2180544..2188167)
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AA seq
778 aa
AA seq
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MEIDLNHPVTEVEKNSFCTNGDSSCSSNSSSSPVSSSIYLELWHACAGPLTSLPKKGNVV
VYFPQGHLEQLASSSPFSHRDMPNFDLHPQIFCKVVNVQLLANRENDEVYTRLTLLPQPE
VVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP
SLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL
RGEGGELRLGIRRAARPRNGLPDSVTGKQNSLPSALSLVSNAISTKSVFTVSYSPRATHA
VFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPERRCSGVVTGTADLDPYKWPNSKWRCL
MVRWDEDVISDHQERVSPWEIDASVSLPPLIIQSSPRLKKLRTGLQAAPPDKPIAGGGGF
LDFKESVRSSKVLQGQENVGLLSPVYRCDTVNHPLDFEVRNKAQQNLILTGIEKAKISEL
TRAHPATHTGFTESDRFLKVLQGQEICSLSSVGALGKPNTGRSSFQMYPGPRPAFYPVAA
ESLRSMYFPYGDVYKNGQDPRTQSYAIFSRENAHFNTSSIQTCVVREEVRKPNQSSEYKT
QESISAAPALCANLRNQKDDFFNGNATGCKLFGFSLNAETSPNSQNTSKRSCTKVHKQGS
LVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSENDVMVVGDDPWLEF
CNVATKIHIYTQEEVEKMTVGITGDDTQSCLDQAXVIMEASKSSSVGQPDCSPTVIRV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgatctgaatcatccagtgactgaggtggagaagaattcattttgtaccaat
ggggactcttcatgttcttctaattcatcttcatctccagtttcctcttcaatttacttg
gagctttggcatgcttgtgctggtcctctcacttctctccctaagaaagggaatgtggtt
gtctacttccctcaaggccacttggagcagcttgcctcttcctctcctttctctcatagg
gacatgcccaattttgatctccacccacaaatattttgcaaagttgtaaatgtgcagcta
cttgccaatagggaaaatgatgaggtctacactcggcttactttgcttcctcaaccagag
gtggtaggacaggatttagaaggcaaagagcttcaagagttaggcgtggatggagagggt
gacgacgcatcaccaacaaaatcaaccccacacatgttttgcaaaacactcacagcttct
gatactagcacccatggagggttttccgttcctcgaagagctgccgaagactgtttccct
tcactggattataaacagcagagaccctctcaagagcttttggccaaagacttgcatgga
gttgaatggagatttcgtcatatttacagaggtcaaccaagaaggcatcttctaactacg
ggatggagtatttttgtgagtcaaaagaatcttgtttcaggggatgcagtgctatttctg
aggggcgaaggtggagagttgagactggggatcagacgagctgctcgacctagaaatggt
cttcctgattctgttactggcaagcagaattcacttcccagtgctctctccttggtgtct
aatgcaatatccaccaagagcgtgttcactgtttcatatagtccaagggccactcatgca
gtgtttgttgtaccctaccaaaagtatataaaaagcatcaccaatgcagtttgcatcggg
acaagattcaaaatgagatttgaaatggatgattctcctgaaagaaggtgtagcggtgta
gtaactggaacagctgacttggatccctataagtggcccaactcaaaatggaggtgctta
atggttagatgggatgaagatgtcatcagtgatcatcaagaacgagtttccccatgggaa
attgacgcttctgtttcactcccacccttgattattcaatcttcaccaaggttgaagaaa
ctgcggactgggctgcaagcagccccacctgataagcccatagctggagggggtgggttt
ttggatttcaaggagtctgtaagatcctccaaggtcttgcaaggtcaagaaaatgttggt
ttgctatcacccgtgtatcgatgtgatactgtaaaccatccactggattttgaggtgcgg
aataaagcacaacaaaatctcatattgacaggaatagagaaggctaaaatcagtgagtta
actagagctcaccctgccacccacacaggattcacggaatctgataggttcctgaaggtc
ttgcaaggtcaagaaatatgctcgttgagttctgttggtgctttgggaaagcccaatact
ggacgcagttctttccagatgtatccaggaccaagacccgctttctatcctgtagcagca
gaaagccttagaagtatgtactttccctatggagatgtatacaaaaatggtcaagatccc
agaacacaatcttatgctatcttctctagagaaaatgcccatttcaatacatcttctatt
cagacttgtgtggttagggaagaagttagaaagcctaatcaatcaagcgagtataagaca
caagaaagtatttctgctgcaccggctttatgtgcaaatctaagaaaccaaaaggatgac
ttttttaatgggaatgctactggctgcaaactttttgggttctccttgaatgcagaaaca
tctccaaattcgcagaacactagtaagaggagttgcacaaaggttcacaagcaaggtagc
ttggtcggaagagctattgatctttcaaggctgaatggctatagtgatctcttgaatgaa
ctagagcgactatttagcatggagggtcttttacgaaatcctgaggaaggatggcgaatc
ttgtatactgacagtgagaatgatgttatggttgtcggagatgacccatggcttgagttc
tgtaatgtggcaaccaagatccatatatatacccaagaagaagtggagaagatgaccgtt
ggaattactggggacgatactcaaagttgtttggatcaagccnctgtgattatggaagca
tccaagtcttcatcagtgggccagccagattgttcgccaacagtaataagggtttga
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