Populus trichocarpa (black cottonwood): 7491149
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Entry
7491149 CDS
T01077
Name
(RefSeq) protein CNGC15b
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7491149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7491149
Ion channels [BR:
pop04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
7491149
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
7491149
NCBI-ProteinID:
XP_024464242
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Position
9:2039302..2043569
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AA seq
706 aa
AA seq
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MGFGNSKSVRFRDDLELSLPPAVNGDGAIKRKYNIDGTQMSDSSRKMMSQMEVSGKTGKS
FKAKILSRVFSEDYDRVKKKILDPRGASIRRWTKIFLVACLVSLFVDPLFFYLPEVWKEL
CIDIGIPLEVGLTIVRSISDVFYMIQILIRFRTAYVAPSSRVFGRGELVIDSKKIALRYL
QKNFWIDLIAALPLPQVLIWIVIPNLSGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSSHI
VKTTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRSVCNLEKLSCEYGF
FDCRRVHDSPHRESWFKSSNITNFCNPDNNYYQFGIYGDALKFDVTTASFFNKYFYCFWW
GLRNLSSLGQNLSTSTYVGEIAYSIIIATLGLVLFGLLIGNMQTYLQSTTVHLEEWRIKR
TDTEQWMHHRQLPHELKQSVRKYDQYKWVATRGVDEEAVLKGLPMELRRDIKRHLCLDLV
RRVPLFDQMDERMLDAICERLQPALCTEGTFLVREGDPVNEMLFIIRGNLDSYTTNGGRT
GFFNSCRLGPGDFCGEELLTWALDPRPSIILPSSTRTVKAILEVEAFALSAEDLKFVASQ
FRRLHSKQLRQKFRFYSHHWRTWAACFIQAAWRRYKKRKEATDLRARENPTAADPALTSP
GSGLSMYAARLKASARRGVLKRSGSDSSVVSSLQKPDEPDFSVDEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgggaattcaaaatctgtaaggtttagagatgatctggaattaagcttaccg
ccggcagtgaatggagatggtgcaattaaacgtaaatacaacattgatggaacacaaatg
tcagactctagtaggaagatgatgtctcagatggaggtgtctgggaagactggaaaatca
tttaaagctaaaatactgtctagagttttctctgaggattatgatagagtgaagaaaaag
atattggatcctcgaggagcatcgatacggagatggactaagatctttttagtagcatgc
ttagtttccttgtttgttgatccacttttcttttacttgcctgaagtctggaaggaatta
tgtattgatattggcataccccttgaagtaggcctgacaattgttagatcaatatctgat
gtcttttacatgattcagattttaattcgttttcgtactgcttatgtcgcgccttcttct
cgtgtttttgggagaggagaacttgttatagattctaaaaagattgcgttaaggtaccta
cagaagaatttctggatcgaccttattgcagccttgcctcttcctcaggtgttaatttgg
attgttatccccaatcttagtggttcaacgatgagaaacacaaaaaatgtccttcgtttc
atcatcatttttcagtatctcccacgactttttctgatatttccactctcatcgcatatt
gtcaagaccactggtgttgtaacagaaacagcatgggcaggagctgcttacaacctgatg
ctttacatgctggctagccatgttttaggagcttgctggtatcttctatcgattgagcga
caggaagcatgctggagaagtgtctgtaatctagagaagttatcttgtgagtatggattc
tttgattgtcgtcgggtgcatgacagtcctcatagggaatcttggttcaaatcaagcaac
atcacaaacttttgcaacccagataataattactatcagtttggaatatatggtgatgct
ttgaaatttgatgttacgactgcatcattcttcaacaaatacttttactgtttttggtgg
ggcttaaggaacctcagctcactggggcaaaatctttcaacaagcacttatgtgggtgaa
atagcatattccatcatcattgcaacgcttggactggttctcttcggattgcttataggg
aatatgcaaacatacctacaatcaacaacagttcacttggaagagtggagaatcaagaga
actgatacggaacaatggatgcatcacaggcagctaccgcatgagttgaagcagtctgtt
cggaaatacgatcagtataagtgggtggccactaggggcgttgatgaggaagctgttctc
aaaggcctgcccatggaactgcgaagagacatcaaacgccatctctgccttgatttggtt
cggagagttccgctatttgatcaaatggatgaaaggatgctagatgcaatatgcgagagg
cttcaaccagcgttgtgcactgaaggcacgtttcttgtgcgtgaaggtgatcctgtcaat
gagatgctgttcataattcgcggcaaccttgattcctacacaactaatggtggccgaact
ggatttttcaattcctgccgccttggtccaggtgacttttgtggtgaggaactattgaca
tgggcattagacccacgcccaagtatcatcctcccatcatctacacgcacagttaaagct
attttggaagtagaggcatttgccctcagtgcagaagacttgaagtttgtagcatcgcag
tttagaagacttcacagcaagcaactaagacaaaagttccggttctactcacaccattgg
agaacatgggctgcctgtttcatacaagcagcatggcgccggtataagaaacggaaggag
gcgactgacctcagagctagagaaaatccaacagctgccgatcctgcattaacatcacca
gggtctggcttatccatgtatgcagcaaggctgaaagcaagcgctagaaggggtgtcctt
aagcgttccggctcagattcaagtgttgtgagctcactgcagaagccggacgaaccagat
ttttcagtagatgaggaatga
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