Populus trichocarpa (black cottonwood): 7491430
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Entry
7491430 CDS
T01077
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7491430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7491430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7491430
Membrane trafficking [BR:
pop04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
7491430
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
7491430
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7491430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_5
Ank
BAR
Ank_2
Ank_3
PH
Ank_4
PH_11
BAR_2
PH_20
ANK_LRRK2
PH_8
TPR_21
PH_13
DUF6760
Motif
Other DBs
NCBI-GeneID:
7491430
NCBI-ProteinID:
XP_002299350
LinkDB
All DBs
Position
1:complement(4999682..5010168)
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AA seq
830 aa
AA seq
DB search
MHFTKLDDSPMFRKQMQSLEEDAESLRERSLKFYKGCRKYTEGLGEAYDGDIGFASALET
FGGGHNDPISLAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKE
ARKRFDKASLLYDQAREKFLSLRKGTRSDIATLLEEELHNARAAFEQARFNLVTAISNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYIHQVLTYAQQSRERSNYEQAALNER
MQEYKRQIDRESRWSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLS
KRSSSLRGDWKRRFFVLDNRGMLYYYRKQCSKPSGSGGQLSGQRNSSELGSGLLGRWLSS
HYHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWI
EKITGVIASLLSSQAPERCLSASPLGSGHHRSASESSSFESTDFDPSAVDEYTSERSLAA
LHERALRSSQQQRASAEKPIDVLQRVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHR
NLGVHISKVRSLTLDVKVWEPSVISLFQSLGNAFANSVWEELLQSRSALQAELIPSGSFK
SDKPQLLFISKPNPADSISIKEKFIHAKYAEKAFVRKPRDHQNTRSVAQQIWEAVRANDK
KAVYWLIVNHEADVSAVYEQASCSSSLTLAKTMLLQELANPDDCCSSYSTGNSVDRSSTI
SLNFPGTTEGQTLEDVDGCTLLHIACETADIGMLELLLQYGANINSTDSGGQTPLHRCIL
RGRAGLAKMLLTRGADPRAVNGKDKTPLELAVESKFDESEVLALLSDSNG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcacaaagctcgatgactctcctatgtttcgcaagcagatgcaatcactggaa
gaagatgccgaatcattgagggagagaagtttaaagttctacaaaggatgtagaaaatat
actgaagggcttggagaggcatatgatggggacattggttttgccagtgctttagaaact
tttggtggagggcataatgatcctattagtttggcttttggaggccctgttatgaccaaa
ttcaccatagccttgagagaaattgggacatacaaggaagttctccgatcccaggttgag
cacatgctgaatgacagattactacaatatgtcaacattgatttgcatgaggtgaaggaa
gcaaggaagcgttttgacaaggctagccttctttacgaccaggctcgtgagaagtttctg
tcactgaggaaaggcacgaggtctgatatagctactcttttagaggaggagcttcataat
gcaagggctgcatttgagcaagctcgctttaatttagtaactgctatttctaatgttgaa
gcaaaaaagaggttcgaatttttggaagcagtcagtgggacaatggatgctcatctacgt
tacttcaaacagggctatgagcttttgcatcaaatggagccatacattcatcaggttttg
acttatgctcaacaatcaagagaaaggtctaactatgagcaggcagctctcaatgagagg
atgcaagagtacaagaggcagattgatcgtgagagtagatggtcttccaatggttctaat
ggatctccaaatggagatggtatacaagccattggtagaagttcacacaaaatgatagag
gctgttatgcaatctgctgcaaaggggaaggttcaaactattagacaaggttatctgtca
aaacgatcctctagcttgagaggtgactggaaaagaagattttttgttctcgataaccga
ggaatgctttattactatcgcaaacagtgcagcaaaccttctggttctgggggtcaactt
tctggtcaaaggaatagctctgagcttggatctggattgttgggtcggtggctttcttct
cactatcatggtggagtgcatgatgaaaagtctgtcgcacatcacaccgtgaaccttctt
acatcaacaatcaaagttgatgctgatcagtcagatctgcgattttgcttcaggatcatt
tcaccaacaaagaactacacattgcaggcagagagtgcactggatcaaatggattggatt
gaaaagataactggggttattgcttcactacttagctctcaagcacctgagaggtgtctc
tcggctagtcccctgggaagcggtcatcatcggtctgccagtgagagtagttcatttgaa
agtactgattttgatccttctgctgtcgatgaatatacatctgagaggagccttgctgct
ttacatgaacgagcattgagaagttcacaacagcagcgagccagtgcagagaagccgatt
gatgtgttgcaaagagtttgtggaaatgataaatgtgctgattgtggtgcccctgaacca
gattgggcatctttaaatcttggagttcttgtttgcattgaatgttctggtgttcaccgt
aatcttggtgtgcatatatcaaaggtaaggtcacttacacttgatgtcaaggtgtgggag
ccttcggtcataagtttgttccagtctctcggaaatgcctttgctaactcagtctgggag
gaattattgcagtcaagaagtgccttgcaggctgaactcatcccctcaggctcattcaag
tcggataaaccacagctgcttttcatcagcaaacccaatcctgctgactctatatcaata
aaggagaagtttatccatgcaaagtatgcagaaaaggcatttgttcgcaagccaagagac
caccaaaatactcggtcagtggcacaacaaatctgggaagctgttcgtgctaatgacaag
aaggctgtatactggcttattgttaatcacgaagcagatgtcagtgctgtgtatgagcaa
gcatcttgtagctcttccctgacacttgctaaaacaatgctattgcaagagctggccaac
cctgacgattgctgctctagctactcaacagggaattcggtggataggtcttcgaccatc
tctttaaactttccaggtacaactgaaggccagaccttggaggatgtagatgggtgtacc
ttgcttcacatcgcttgtgaaactgctgacattggcatgctagaacttctcttacagtat
ggtgcaaatataaattcaactgattcgggaggtcagacgccactccaccgttgtattctt
agaggcagagctggacttgcaaaaatgctcctcacaaggggagcagatccacgtgctgtc
aatggcaaagataaaaccccacttgagcttgcggtagagtccaaatttgatgagagtgag
gtccttgctctattatcagactctaatggctga
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