Populus trichocarpa (black cottonwood): 7491456
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Entry
7491456 CDS
T01077
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
7491456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7491456
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
7491456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
Motif
Other DBs
NCBI-GeneID:
7491456
NCBI-ProteinID:
XP_002299376
UniProt:
B9GMZ1
LinkDB
All DBs
Position
1:complement(5522265..5527748)
Genome browser
AA seq
222 aa
AA seq
DB search
MKQSKDPFEAAYVEQEESPPESPVAQDDYDTQASNAAAAADDSQGAVVGQDDDDLGGGGR
NDFAHSSDHPSASRPMLGSARSKAKNKDDDEEEEEDNMDVELSKLASTADPDKMAKMQTI
LAQFTEGQMSRYESFRRSALQKTNMKRLLVSITGSQKISLPMTIVVCGIAKMFVGELVET
ARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcgaaggatccattcgaggcagcgtatgtggagcaagaagaatcgccacca
gaatccccagttgcccaagatgattatgacactcaagcttctaacgctgctgctgctgct
gatgattctcagggtgctgtcgttggtcaagatgatgatgaccttggcggtggaggccgc
aatgattttgcccattcctctgaccacccatctgcttcgaggcctatgttgggctctgca
agaagtaaggcaaagaataaagacgatgatgaagaggaggaggaagataacatggatgtt
gagctttcgaagttggcttctactgctgaccctgataaaatggcaaagatgcagactatt
ttagctcagtttactgaaggacagatgagtaggtacgaatcattccgcagatctgcactg
cagaagactaacatgaaaaggttgttagtgagcatcactggatcccagaaaatttcttta
ccaatgacgattgtagtttgcggtatagcaaaaatgtttgttggtgaacttgttgaaaca
gccagaattgtaatgacggagaggaaggaatctgggcctatcaggccttgccacataaga
gaagcatatagaagactaaagcttgaaggcaaagtaccgaagagatcagtaccaaggctc
tttcggtaa
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