Populus trichocarpa (black cottonwood): 7491584
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Entry
7491584 CDS
T01077
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
7491584
03400 DNA repair and recombination proteins [BR:
pop03400
]
7491584
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
7491584
DNA replication proteins [BR:
pop03032
]
Prokaryotic type
DNA Topoisomerases
7491584
DNA repair and recombination proteins [BR:
pop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
7491584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
7491584
NCBI-ProteinID:
XP_002315402
UniProt:
B9HVG1
LinkDB
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Position
10:complement(22146169..22157384)
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AA seq
948 aa
AA seq
DB search
MNPSSLTRLNPNSCDPMSLPSTLRLSSLLHRLPPPSRRYFSFLHHRSVSDLRFSSSSPRI
RPVVQSRRREEPATDDSENGSLLVKDPNGGSPGGGNGRVVQTELHKEATEAYMAYAMSVL
LGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDAL
VRMAQDFSLRCPLIQGHGNFGSVDADPPAAMRYTECRLDGLTEAVFLADLEQDTVDFVPN
FDNSQKEPSLFPTRLPTLLLNGSSGIAVGMATKIPPHNLGELVDVLCALIHNPEATLQEL
LEYMPGPDFPTGGIIMGNQGILDAYRSGQGRIVVRGKTDVELLDSKTKRNAVIIKEIPYQ
TNKASLVEKIAELVEDKNLDGISDIRDESDRSGMRIVIELKRGADPSIVLNNLYRLTPLQ
SSFSCNMVGILDGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSEAQKRRHIVEGVMAGL
DNLDRVVDIIRKASSNAIASADLRNEFSLSEKQAEAILDISLRRLTLLEGKKFVEESKSL
MEQITKLEELLSSRGNILQLIEQEAVELKNKFSNPRRSMLEDSDSGQLEDIDVIPNEEML
LAISEKGYVKRMKPNTFNLQNRGTIGKSVGKLRDSDAMSDFIVCHAHDRVLYFSDQGIVY
SAPAYKIPECTRAAAGTPLIQFLSLSDGERITSIIPVSEFVEDQFLLMLTVNGYIKKVSL
NSFSAIRSTGIIAIQLVPGDELKWVRCCTNGDLVAMASQNGMVILTSCENIRALGRNTRG
GVAMRLREGDKIASMDIIPASLQKDLEVASKDSENNNKGTGPWLLFVSESGHGKRVPLSS
FKQSRLNRVGLIGYKFFEEDHLAAVFAVGFSLTEDGESDEQVVLVSQSGTVNRIKVRDIS
IQSRFARGVILMRLEHAGKIQSTSLISAADPELEELAPVPELLSEASL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctcttctcttacaagattaaaccctaattcttgcgaccccatgtctctcccc
tccactctccgtctctcctctcttctccaccgtctccctcctccttcccgccgttatttc
tctttcctccaccaccgctccgtctccgacctccgcttctcctcctcctccccccgcatc
cgtcccgttgttcaatctcgccgccgtgaggaacccgccactgatgatagtgagaatggg
agcctgttagtgaaggatccgaatgggggtagtccaggcggtggaaatgggcgggttgtt
caaacggagcttcataaagaggctactgaggcctatatggcttatgctatgtctgttttg
cttggtagagccttgcccgatgttagagatgggctaaaaccagttcaccggaggattcta
tttgcaatgcatgaattggggctttcttcgaaaaagccgtttaaaaaatgtgctagagtt
gttggtgaggttttgggcaagtttcatccccatggagatactgctgtctatgatgctcta
gttcgaatggcgcaggatttctcactgagatgccctcttattcaagggcatgggaatttt
ggttcggttgatgcggatcctcctgccgccatgcgttatacagaatgcaggctggatgga
cttacagaggcagtttttttggctgatctcgaacaagatacagttgattttgtccctaac
tttgacaattcccaaaaggaaccttcactttttcctactcggcttccaactttattgttg
aatggttcttctgggattgcggttggcatggcaaccaaaattcctcctcataatcttgga
gagctggtggatgtgttatgtgccctaattcacaacccagaagccactttgcaagagttg
ttagaatacatgcctggacctgactttccaactggaggaattatcatgggaaatcaaggg
atcttagacgcatatcgatctgggcaaggacgtatcgtagtcagaggaaaaacagatgtt
gaattgcttgactcgaaaacaaagagaaacgctgttatcataaaagagattccttatcaa
accaacaaagcatcgctggtggaaaaaattgctgaacttgtggaggataagaatttggat
ggcattagtgatatccgtgatgaaagtgatcgttctggcatgcgtatagtcattgagctg
aaacggggggcagatccgtcaattgtgttaaataatctctatcgtcttactcctcttcag
tctagttttagctgcaacatggttggtattcttgatggacaacctaaacagatgggtctg
aaagagttgcttcaggcattcttagacttcagatgctctgtcgtagaacggcgtgccatg
ttcaagctttctgaagcacagaaaagaagacatattgtcgagggcgtcatggcggggctt
gataatttggatagagtggttgatataattagaaaagcttcaagcaatgcaattgcatcc
gctgatctaaggaatgaattcagtctgtctgagaaacaagctgaagctattttggacata
agcctaagaaggcttacccttcttgaggggaaaaagtttgttgaagaaagtaaatcattg
atggaacaaataactaagctagaggaactattgtcaagcaggggaaatatattgcagttg
attgaacaagaagcagtcgagcttaaaaataagttctccaatccaaggcgttcaatgttg
gaggactctgatagtggtcagcttgaagatatagatgttattccaaatgaagaaatgctc
ctggcaattagtgaaaagggctatgttaagcggatgaagcctaacacgtttaatcttcaa
aatcgtggaacaatcggtaaatctgttgggaagttgagagatagtgatgcaatgtctgac
ttcattgtctgtcatgcacatgaccgtgtgctatatttcagtgatcagggaatagtatac
tctgctcctgcttataaaatccctgaatgcaccagggctgctgctggcacaccactgatc
cagttcttatctttatctgatggtgaaagaataacttccattattcctgtgagcgagttt
gtggaagatcaatttctactgatgcttactgtcaatggctacatcaagaaagtatctttg
aactctttctcagccatacgttcaactggaatcatagcaatacagttggttcctggcgat
gaactaaaatgggtccgctgttgcacaaatggtgatcttgtggccatggcttcacaaaat
ggaatggtcatcctcacttcctgtgagaatattcgagctctaggtagaaatacaaggggt
ggggtggccatgaggctaagagaaggtgacaagatagcaagcatggacataataccagct
tccctgcagaaagacttggaggtggcgtcaaaagattctgagaataacaacaagggcact
ggtccgtggttgttgtttgtgtctgagagtggtcatggaaagcgggttcccctcagtagc
ttcaagcaatcacgtttgaacagagttggattaattggttataagttctttgaggaagat
cacttggcagctgtctttgcagttggtttttcattgacagaagatggtgaaagtgatgag
caagtggttcttgtaagccaaagtggcactgtcaatcgaattaaagttagggatatttca
atacaatcccgctttgcaaggggagttattttgatgcggctggagcatgctggcaagatt
cagtcaacttccttgatctccgctgcagatcctgaattagaggaattggcacccgtgcct
gaactcctatccgaggcatcattataa
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