Populus trichocarpa (black cottonwood): 7491593
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Entry
7491593 CDS
T01077
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
7491593
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7491593
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7491593
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
7491593
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
7491593
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
7491593
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Ubiquitin_2
Malt_amylase_C
pP_pnuc_2
CDI_Immunity_Comp
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
7491593
NCBI-ProteinID:
XP_002316470
UniProt:
B9HVH8
LinkDB
All DBs
Position
10:22064258..22077113
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AA seq
1116 aa
AA seq
DB search
MTLMTPPPLDQQEDDEMLVPHTEFTEGPQPMEVAQAETATAVDAQSVDDPPSARFTWTID
NFSRFNTKKLYSDVFVVGGYKWRILVFPKGNNVDHLSMYLDVADSTNLPYGWSRYAQFSL
TVINQLHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGRGYLVNDSCIVEADVAVR
RVIDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDIPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
NGKYLSPEADCSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDVK
RALEEQYGGEEELPQTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKVICNVDEKDIAEHL
RIRLKKEQEEKEQKRKEKAEAHLYTIIKVARSEDLLEQIGKDVYFDLVDHDKVRSFRIQK
QITFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPQEESQSVGQLREVSNKA
NNAELKLFLEVEVGQDSRPVPPPEKTKEDILLFFKLYDPSKEKLRYVGRLFVKGSGKPLE
ILTKLNEMAGFAPDQEIELYEEIKFEPNVMCEHIDKRLTFRSSQLEDGDIVCFQKPPQMG
SNEQCRYPDVPSFLEYMHNRQVVRFRSLEKSKEDEFCLELSKLHTYDDVVERVANHLGLD
DPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHPSAELRLLEVFYHKIYKI
FPHNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQVQVQNFGEPFF
LVIHEGEALADVKMRVQRKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSNRFQRRDIYG
AWEQYLGLEHSDNAPKRSYAANQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctccgttagaccaacaagaagacgatgagatgttggtccca
cacactgaatttactgagggacctcagcctatggaagtagcacaagcagaaacagcgacg
gcagttgatgcacagtcagtggatgatccaccatcagctaggtttacatggacaattgat
aatttttcgaggtttaatactaagaagctttactccgatgtttttgttgttggaggctac
aagtggcggatactggtttttccaaaggggaacaatgtggatcatttatccatgtattta
gatgttgcagattcaactaatttgccatatgggtggagtcgatatgcgcagtttagcttg
actgtcatcaatcaacttcaccaaaaatattcaattcggaaagacacgcagcaccagttc
aatgcacgtgagagtgattggggcttcacttcatttatgccacttggggaattgtatgac
cctgggagagggtatcttgtaaatgactcatgcatagttgaagctgatgttgctgttcgt
agggttattgattactggtcacatgattcaaaaaaggagaccggttatgttggtctcaag
aaccaaggagctacatgctacatgaactctctccttcaaacgctgtatcatattccttat
tttagaaaggctgtatatcatatgccaacaactgagaatgatatcccatcagggagcatt
ccactggcgttgcagagtttgttttataaacttcaatacagtgacactagtgtagcaaca
aaagagttgacaaagtctttcggctgggatacatatgactctttcatgcagcatgatgtc
caagaacttaatagggttctttctgaaaagcttgaagataaaatgaagggaactgtcgtg
gagggcactatacaacagttatttgaagggcaccatatgaattatattgaatgcatcaat
gttgactataagtcgacaagaaaggagtcattttatgatcttcagcttgatgtcaaaggc
tgtcgagatgtttatgcttcttttgataagtacgtggaggtggaacgtcttgagggtgac
aataagtaccatgctgaacaacatggattgcaggatgctaggaagggtgtcctattcatt
gacttcccccctgttctccaacttcaacttaaaaggtttgagtatgattttatgcgggat
acgatggtgaagataaatgatcgctatgagttccctttgcaacttgatctggatagagag
aatggaaaatatttatcacctgaggccgactgcagtgtccgcaatctctacacccttcac
agtgttttggttcacagtggcggcgtgcatggtggacactactatgcttatatcagacca
actctatcagatcagtggttcaaatttgatgatgagcgggtaaccaaagaggatgtgaaa
agggcattagaggagcagtatggtggtgaggaagagttaccacagacaaatcctggcttt
aacaactctcccttcaagtttacaaaatactcgaatgcttatatgcttgtgtatatacgt
gaaagtgacaaggaaaaagtaatctgtaatgtggatgagaaggatattgcagagcacctc
aggataagactgaagaaagaacaggaagagaaagagcaaaagagaaaggaaaaagctgag
gcccacttgtacactatcataaaggttgcacgtagtgaggatctacttgaacagattggc
aaagatgtatattttgatctcgtggatcatgacaaagttcgtagtttccgtatccagaaa
caaataacctttaaccttttcaaggaagaagttgctaaagaatttggtattccagtgcaa
tttcaacgtttttggctgtgggcaaaacgacaaaatcatacataccgtccaaatcggcca
ctgactcctcaggaggaatcacaatctgttggacaattgagagaggtttctaataaggca
aataatgcagagctgaagttgtttctggaagtagaagttgggcaggattcgcgacctgtt
cctccacctgagaagactaaagaggatatccttcttttctttaaactttatgatccatca
aaagagaaactccggtatgttgggaggctgtttgtgaagggcagtggtaaaccattggag
atcctgacaaaattaaatgaaatggctggctttgctcctgaccaggagattgaactttat
gaggaaataaaatttgaacctaatgtcatgtgtgaacacattgacaagaggctcactttt
cgttctagccagcttgaagatggagatattgtttgctttcagaaaccccctcaaatggga
agcaatgaacagtgccgctaccctgatgtgccttcattcctcgagtatatgcacaatcgc
caggttgttcgatttcgatctttggagaaatcaaaagaggatgaattttgtcttgagcta
tcaaagctccacacttatgatgatgttgtggaaagagtagctaaccatcttggcttggat
gacccatccaaaattaggcttacatcccataactgttactcccagcaacctaaacctcaa
cccatcaagtaccggggagtggatcatttatctgatatgctggtgcactacaatcagaca
tctgatattctatactatgaagtattggacatccctcttccagaactgcaaggccttaaa
acattaaaggttgcatttcatcatgctaccaaggatgaggtagtgattcataccatcaga
ttgccaaaacagagcactgtaggtgatgtcatcaatgaccttaagacaaaggtggagctg
tctcatcccagtgctgaacttagattgcttgaggttttctatcacaagatctacaagatc
tttccacataatgaaaaaatcgagaacattaatgatcaatactggacactacgtgcagag
gagatacctgaagaagagaaaaaccttggtcctcatgatcgtttgattcatgtatatcat
ttcatgaaagacacaactcaaaaccaggtgcaggttcagaattttggagaaccatttttc
ctggtcattcatgagggcgaggctttagctgacgtcaaaatgcgtgtacagagaaaattg
caggttcctgatgaagaattttcaaagtggaagtttgcatttttgtcactaggtcgcccc
gagtaccttcaagactcagacattgtgtccaatcgttttcagagaagggacatttatggt
gcctgggagcaatatcttggactcgagcattctgacaatgctcccaaaaggtcatatgct
gctaatcagaatcgtcatacatttgagaagccggtaaaaatctacaattag
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