Populus trichocarpa (black cottonwood): 7491767
Help
Entry
7491767 CDS
T01077
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI7
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7491767
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
7491767
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
7491767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
UBA_ARIH2_N
zf-RING_UBOX
zf-C3HC4_2
Rcat_RNF216
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
7491767
NCBI-ProteinID:
XP_002310443
UniProt:
B9HH71
LinkDB
All DBs
Position
7:14229834..14237614
Genome browser
AA seq
569 aa
AA seq
DB search
MDSEDDMMDANDVESVDDGFFSGEIEDDDYSDGDYYDNDDVDDDDDGPDYDFMAEAVDDT
DDLSFRFQQSYTVLKEEDILNRQEDDVTRVSTVLSITRVAASILLRHYNWSVSKVHDAWF
ADEDAVRKSVGLLDKQVVQFSNARELTCGICFESIPCDKIISAACGHPFCNTCWSGYIST
TINDGPGCLMLRCPDPSCRAAVGQDMINLLAPGGDKEKYSRYLLRSYIEDNRKTKWCPAP
GCEYAIDFAAGSGSFDVSCLCSHSFCWNCAEEAHRPVDCGTVTKWILKNSAESENMNWIL
ANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAK
QEGAYDESERRREMAKNSLERYTHYYERWASNQLSRQKALVDLHQMQTVHLEKLSDIHCT
PESQLKFIAEAWLQIVECRRVLKWTYAYGFYLHEHEHAKRQFFEYLQGEAESGLERLHQC
AEKELQQFLAADGPSKEFDEFRTKLAGLTSVTKNYFENLVRALENGLADVDSHGACSKTT
SSKNASVSKGKGGKGKGGKTGGSSKNGDD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggattcggaggatgatatgatggacgcgaacgatgtcgaatcagttgatgatggtttc
tttagtggtgagatagaagatgatgattacagtgatggtgattattatgataatgatgat
gttgatgatgatgatgacggtcctgactatgatttcatggctgaagctgtagacgatacg
gatgacttgtccttccgctttcagcaaagttatacagtcttgaaggaagaagatatactt
aatcgtcaagaagatgacgtaacaagagtgtctactgtcctttccataacaagagttgcg
gcaagtatcttactccgacattacaattggagtgttagcaaagtgcatgatgcatggttt
gctgatgaagatgctgtccggaaatctgttggcttgctagacaagcaagtagttcagttt
tctaatgctcgagaacttacttgtggaatttgttttgaatccattccatgtgataagatt
atttctgctgcttgtggccatcctttctgtaatacatgctggtcaggttacattagcaca
accattaatgatggtcctggatgtttgatgctaagatgccctgatccatcttgtcgagct
gctgttggtcaagacatgatcaatttgttagcacctggtggagataaggagaaatactct
cggtacctccttaggtcctatattgaagacaacagaaagaccaagtggtgtcctgctcca
ggatgcgagtatgcgattgattttgctgctggtagtggaagttttgatgtttcctgccta
tgctcacatagcttttgctggaattgtgcagaggaagctcatcgtccagtggactgtgga
acggtgacaaagtggattttgaagaacagcgctgagtctgaaaacatgaattggatactt
gctaattccaaaccttgtccaaaatgcaagcgaccgattgaaaaaaaccaagggtgcatg
cacataacatgcaccccaccttgcaaatttgaattttgttggctgtgccttggtgcatgg
tcagatcatggtgagaggacaggtggtttctatgcttgtaacagatatgaggcagccaag
caagagggagcatatgatgagtcagagaggaggcgagaaatggcaaaaaattctttggag
agatacacccattattatgaacgatgggcaagcaatcagttgtcaaggcaaaaagctctt
gtagatttacatcaaatgcagactgtacatcttgagaagcttagtgacatccattgcacg
cccgagtctcagctgaagttcatagcagaagcctggcttcagatagttgaatgcaggcga
gttctgaaatggacctatgcgtatgggttttatctacatgagcatgagcatgccaagaga
cagttttttgagtacttgcaaggtgaggctgagtctggtttggaaaggcttcatcaatgt
gcagagaaggaattacaacagtttcttgctgccgatggcccatcaaaagaatttgatgag
ttccggacaaagttagctgggctgaccagtgtgacgaaaaattatttcgagaacctggtc
agagcattagagaatggcctagcagatgtggactctcatggtgcttgtagcaagaccacg
agctcaaaaaatgccagtgtcagcaaagggaaaggtggcaagggaaagggtggtaaaact
ggtggttccagcaaaaatggagatgattaa
DBGET
integrated database retrieval system
