Populus trichocarpa (black cottonwood): 7491874
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Entry
7491874 CDS
T01077
Name
(RefSeq) heat shock factor protein HSF8
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7491874
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7491874
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
BRE1
TMF_TATA_bd
TMEM43
Seadorna_VP6
APG6_N
Motif
Other DBs
NCBI-GeneID:
7491874
NCBI-ProteinID:
XP_002303429
UniProt:
B9GZI0
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Position
3:12107387..12113535
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AA seq
507 aa
AA seq
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MDGTINSASGGDSSISGGGAQAASVPMASQSNAPPPFLSKTYDMVDDPATDAVVSWSSTN
NSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLL
RIISRRKPAHGHANQQPQQPHGQNSSVAACVEVGKFGLEEEVERLKRDKNVLMQELVRLR
QQQQSTDSQLQTMVQRLQGMEQRQQQMMSFLAKAMNSPGFLAQFVQQQNDNNRRITEANK
KRRLKQEDVPENEGSGSHDGQIVKYQPLMNEAAQAMLRQIMKMDASSKLESYDNNLGAKD
SGSSSSHTSGVTLQEVLPTSGQSAHIPAAFGISRQGPSAPISEIQSSLQIASSEKVTASQ
FPDISMPVGAQGATSIPIPQADVIMPHVSQMLEMVPENVADIPCEDYMEPETCNDGFIDL
ASLGINGIPIDIDNISPDPDIDALLDNSSFWDDLLVQSPEHEDIESSSVEGKANGNDVQP
NANGWDKAQHVDQLTEQMELLTSDKKL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggatggaacaatcaactctgcaagcggtggcgactcctcgatcagcggcggtggggca
caagcggcgtcggtgccgatggcgtcacagtcgaatgcgccgccgccatttctaagtaag
acttacgacatggtagacgatccggcgacagacgcggtggtgtcttggagttcgacgaat
aatagttttgtggtttggaatccgccggagttcgctcgcgatcttttgccgaagtatttc
aagcataataatttctccagctttgttaggcaactgaacacttacggttttcgaaaggtg
gatccagaccgttgggaatttgccaatgaaggatttttgaggggtcagaagcacctgctt
aggattatcagtcggcgaaaacctgcccacgggcatgctaatcaacagccacaacaaccg
catggacagaactcatcagttgccgcctgtgttgaggttgggaaatttgggctcgaggaa
gaggtggagaggcttaagagggacaagaatgtccttatgcaagaacttgttaggttgagg
cagcagcaacagtccacagatagccagttgcaaaccatggtacagcgacttcaaggaatg
gagcagcgtcagcaacagatgatgtcattcctggccaaggcgatgaacagcccaggcttc
ttggctcagtttgtacagcagcaaaatgacaacaataggcgcataacggaagccaataaa
aaacgaaggctcaagcaggaggatgttcctgagaatgagggttctggttctcatgatggg
cagattgtgaagtatcagcctctgatgaatgaggcagcccaagcaatgcttaggcagatt
atgaaaatggatgcttcttctaagttggaatcttatgacaataatcttggtgcaaaagac
agtggaagctcttcgagccacacatcaggagtgactcttcaagaggttctgccaacttca
gggcaatccgctcatataccagcagcttttgggatttccaggcagggcccatcggctcca
atatctgaaatacaatcttccctgcaaattgctagttctgaaaaggttacagcttctcag
tttccggatataagtatgccggttggagcacagggggcaacctccatacctattcctcag
gcagatgtgatcatgccccatgtttctcaaatgcttgaaatggtaccagaaaatgttgct
gatatcccttgtgaagattacatggaaccagagacatgcaatgatggattcatagatcta
gcttcattaggaattaatggaatacccatagatattgataacatttcccctgatcctgat
attgatgctttgcttgataattctagcttctgggatgaccttcttgtgcagagtccagag
catgaggatattgaatcaagttctgtagagggtaaagccaatggaaatgatgtgcagcca
aatgcaaacgggtgggacaaagctcagcatgtggatcagctgacagaacaaatggagctt
ctgacatcagacaagaagctttaa
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