KEGG   Populus trichocarpa (black cottonwood): 7491965
Entry
7491965           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7491965
  KO
K03108  signal recognition particle subunit SRP72
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03060  Protein export
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    7491965
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pop02044]
    7491965
Secretion system [BR:pop02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   7491965
SSDB
Motif
Pfam: SRP72 TPR_19 SRP_TPR_like TPR_16 ANAPC3 ARM_TT21_5th TPR_1 ARM_TT21_N TPR_9 T7SS_EccA1_N
Other DBs
NCBI-GeneID: 7491965
NCBI-ProteinID: XP_002308499
UniProt: B9HCM4
LinkDB
Position
6:22196400..22199700
AA seq 663 aa
MAPKVKGKATASQQPPPPIEDLFSNLNRHIERSEFEQAVKVADQVLSVAPNDEDAIRCKV
VALIKCDSIDKALSTIHSARRQNLPFDFSYFKAYCLYRQNKLDEALESLKGLERTSETML
LESQILFRLGKMDACVDVYQKLQKSKIDTLEINLVAGLILAGKSSQVQGMMEANRIKASS
SFELAYNTACSLIERNKYTDAEQLLLTARRVGQEALMDDNLAEDDIEIELAPIAVQLAYV
QQLLGRSPEAMEAYTEIINRNLADESSFAVAVNNLIALKGSKDVSDNLRKLDRLKEQDAQ
AFQLARGLDKLSPKQKEAIYANRVLLLLHTNKMDQARELVTALPDMFADSVLPVLLQAAV
FVRENKAAKAEEILGQFAEKFPDKSRVILLARAQVAAAAGHPQIAADSLSKILDIQHMPA
TVATLVALKERAGDVDGASTVLDSAIKWWSNAMTEDDKLNVIMQEAASFKVRHGKEEDAA
RLYEELVRSRGSIEALVGLVNTVARVDVDKAEAYEKKLKPLPGLKGIDVDSLEKTSGAKH
VEGASVVVTGAHEEGKKEKPKKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPK
RKDKRAAQVRGSQGAVVREKHEAGATSTSSNTSNSKSSQATTSKVAAEHSKPSSKSSRKK
SRN
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggctcccaaagtgaaaggcaaagcgacggcatcgcagcagcctccccctccaattgaa
gatctattcagtaacctcaatcgacacatcgagcgatctgagttcgagcaagccgtcaaa
gtagccgatcaagttctgtcagtagctccaaacgatgaagacgcaattcgatgcaaagta
gtggctttgataaagtgtgatagcattgacaaagctctttcgactatccactctgctcga
aggcaaaaccttccttttgatttctcttacttcaaggcatactgcttataccgacaaaac
aagttggatgaagcattggagtcgttgaaaggtcttgagagaacttcggaaacaatgttg
ctagaatctcagattctgtttcgtctaggaaaaatggatgcttgtgttgatgtctatcag
aagcttcaaaaatcgaagattgatactttagaaataaatcttgttgctgggttgattttg
gctgggaagtcttctcaagttcagggaatgatggaggcaaatcggattaaagcttctagc
agttttgagttggcatacaacaccgcttgttctttgattgagaggaataaatacactgat
gcagaacagcttttgctgacagcccgaagagttggtcaagaagcactgatggatgacaat
ttggctgaggatgatatagagattgaattggctcctatagctgtgcagttggcatatgtt
caacaactcttaggacgttcaccagaggccatggaagcttacacagaaatcattaatcga
aatttggcagatgagtcatcctttgcagttgctgtgaacaatcttattgctctgaaaggt
tcaaaagatgtttctgataacctgagaaaacttgatcggctaaaagaacaagatgcacag
gcttttcagcttgctcgtggacttgacaaactttctccaaaacaaaaggaagcaatatat
gcaaaccgagtgcttttgcttctccacacgaataagatggatcaggcacgagaacttgtc
actgctctgccagacatgtttgctgacagtgtgctgccagtgttgcttcaagctgcggtc
tttgtcagagagaacaaggctgctaaagctgaagaaatacttggccagtttgctgagaag
ttccctgacaagtctagggtcattcttcttgcaagggcgcaagttgctgctgctgctggc
catccccaaattgcagccgactccctgtctaagatacttgatattcagcacatgcctgct
actgttgctactctagttgctcttaaagagcgtgctggagatgttgatggtgcatccact
gtgcttgactctgcaatcaaatggtggtcaaatgccatgactgaggacgacaagctgaat
gttataatgcaagaggctgcttcattcaaggtcaggcatggcaaggaggaagatgctgcc
cgcctatatgaggagcttgtcagaagccgggggagcatagaggctttggttgggctggtg
aatacagttgcccgggtggatgttgacaaggcagaagcctatgagaagaagctgaaacca
ttgccaggtctgaaggggattgatgtggatagtttggagaagacttctggagctaagcac
gttgaaggtgcgtctgttgttgttacaggagcacatgaggagggtaagaaggagaagcca
aagaaaaagagaaagagaaagccaaggtatccgaaagggtttgatcctgctaatccaggc
cctcctccagatccagaaaggtggctccccaagagagagagatcgagttacaggcccaag
agaaaggataagagggcagctcaggtgagaggttctcagggagctgtagtgagagaaaaa
catgaagctggtgctacctctactagttccaacacatcaaattcaaaatcaagccaagct
accacttccaaagtagctgcagaacactccaagccatcatcaaagtcatcaagaaagaag
tcaaggaattaa

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