KEGG   Populus trichocarpa (black cottonwood): 7491975
Entry
7491975           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7491975 isoform X1
  KO
K15340  DNA cross-link repair 1A protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7491975
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    7491975
SSDB
Motif
Pfam: DRMBL SAM_1 SAM_2 Lactamase_B_2 La FLIC_barrel Lactamase_B RMMBL
Other DBs
NCBI-GeneID: 7491975
NCBI-ProteinID: XP_002309453
UniProt: B9HCP5
LinkDB
Position
6:complement(22347009..22352978)
AA seq 740 aa
MSSKFNSSQFSSLDDDDDDFQIPLSQTPKQTLSIRNKPADNPRRPSKKPKKPPNPGKENI
DPNSLLLYQKTESGANDFNLDENCSLDFIESSIDCTVSSKVGNEKFDSGSGKKEKLEVSG
GYLCNSIEARLMKSRVDYSGVNVGNEEDFEENSELDALIKLCTEEEESEAREKIKVNCNG
DECCFVLCPLCGTDISDLSEEFRLVHTNECLDKEENSVTYVVLGGDDGRPEVVPRGVEGP
VCGPKKVVVSPVVKWLRNLGLERYEEDFVREEIDWETLQWLTEEDLFGIGVTALGPRKKI
VHALSELRKGSNHAIEAHGDAHAFGEVGSRRSHGAEMQVEASKIIGDDTSKPTANKLITD
YFPGSVPIKKKTSVISKEQRGAEKSQPGYVRKQGVKNYTKKGKFKDIPLWCSIPGTPFRV
DAFKYLRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSLITAKLVNLKIGIPWDSLHVLP
LNQKICIAGVDVTCLDANHCPGSIIILFEPPNGKAVLHTGDFRFSEKMVTMPVLQMSSIH
TLILDTTYCNAQYDFPKQEAVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLFLEVARVL
HKKVYVNMAKFRLLECLGFPEEDMRWITLNEQESHIHVVPMWTLASFKRLKHLSSQYAGR
FTLIVAFSPTGWTFGKGKKKSPGRRCQQGTIIRYEVPYSEHCSFTELREFVKFVSPENII
PSVNNDGPDSANDMVSLLLS
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgtcctcaaaattcaattcgtcccaattttcctccctcgacgacgacgacgacgacttc
caaatccctctctcccaaacaccaaaacagactctttctatccgcaacaaacccgctgac
aatcctcgccgtccgtcaaaaaagccaaagaaaccccccaatcccggcaaagaaaatata
gatcccaactctctactcctatatcagaaaactgagtccggtgccaatgacttcaattta
gacgagaattgcagtttggattttatagagtcaagcatcgattgtactgtttcttctaaa
gttggaaacgagaaatttgatagcgggagcggtaaaaaagaaaaattggaagtgagtgga
ggatatttgtgtaattcgattgaggctaggttaatgaaatcaagagtggattatagtgga
gttaatgttggtaatgaagaggatttcgaagaaaatagtgagcttgatgccttaattaag
ttatgtaccgaggaagaagaaagtgaagctagagagaaaattaaggttaattgtaatggc
gatgaatgttgttttgtcttatgtccgctttgtgggacagatatttcggatttgagcgag
gaatttcgattagttcatactaacgagtgcctggataaagaagaaaatagtgttacatat
gttgttcttggtggtgatgacggcagacctgaggttgtgccacgaggcgtggagggtcct
gtttgtggtccgaagaaagttgttgtgtcacctgttgttaaatggctaaggaatctgggt
ttagagagatatgaagaggattttgttcgagaagagattgattgggagactttacagtgg
ctgacagaagaggacctctttggcattggtgtcactgcacttggtcctaggaagaagatt
gtgcatgctcttagtgagcttagaaaagggtctaatcacgcaatcgaggcacatggagat
gcacacgcctttggtgaagttggttcacggagaagccatggagcagaaatgcaagtagag
gcttctaaaattattggcgatgacactagtaaaccaactgcaaacaaattgattacggat
tattttcctggatctgtacctatcaagaaaaaaactagtgtcatctctaaagaacaacgg
ggagcagaaaaaagtcagccaggctatgttcgtaaacaaggggtgaaaaactatactaaa
aaaggaaagttcaaagatattcctttgtggtgtagcataccagggacaccatttagagtg
gatgctttcaaatatcttagaggagattgttcccattggtttcttactcacttccacatg
gaccattatcaaggattaacaaggtctttctgtcatgggaagatttactgctccttgatc
acagcaaagcttgtaaatttaaagattgggatcccttgggatagtttacatgttttacct
ctcaaccaaaagatctgtattgctggtgttgatgtgacatgcttggatgcaaaccactgt
ccaggctccattataattctcttcgaacctcccaatggtaaggctgtgctacacacggga
gattttcgtttttctgagaagatggttacaatgcctgttttgcaaatgtcttctatccat
actctcatccttgatactacatattgtaatgcccagtatgactttccgaagcaggaggct
gtaatacaatttgtcattgaggccattcaagctgaagctttcaaccccaaaacacttttt
ttgatcggaagctatacaattggaaaggaaaggttgtttttggaggttgctcgtgtgctc
cataagaaggtttatgtcaacatggcaaaattccgtcttttagaatgcttggggttccct
gaagaagatatgaggtggattacattaaatgaacaagaaagccacattcatgttgtgcct
atgtggacgcttgcaagcttcaaaagattgaaacatttatcgagtcaatatgcaggtcga
ttcactctcatagttgctttctcccccactggctggacatttggtaaagggaagaagaaa
tctccagggagaaggtgtcagcagggaactattataagatacgaagtaccatacagtgag
cattgcagttttacagaactcagagagtttgtgaagtttgtgtctcctgaaaacataata
ccaagtgtaaataatgatggaccagattctgccaatgatatggtttccctcctgctgtct
tga

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