Populus trichocarpa (black cottonwood): 7492003
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Entry
7492003 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7492003
KO
K24796
TBC1 domain family member 13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7492003
Membrane trafficking [BR:
pop04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
7492003
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Ortholog
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GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7143
Motif
Other DBs
NCBI-GeneID:
7492003
NCBI-ProteinID:
XP_052302668
LinkDB
All DBs
Position
1:32703794..32708783
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AA seq
487 aa
AA seq
DB search
MVKKKVPDWLNSSLWSTTPSASSSSTATTDTNIFDHHSPTTASPPLESPINPPLPPAAIR
DEQQQQPPRHHHPQKPEIKDKLSKSSIVDDDDNNNSIINDNYSDDNIINNKIIITNNDIR
NVDDDESAAEDISKQALLLTELSKKVINMGELRRIASQGIPDGAGIRSTVWKLLLGYLAP
DRSLWSSELAKKRSQYKHFKEDLLMNPSEIARRLEKTTVLNNDNGKSESRCVLSRSEITH
GEHPLSLGKSSVWNQFFQDSEIIEQIDRDVKRTHPDLHFFSGDSSLAKSNQEALRNILTV
FAKLNPGIRYVQGMNEILAPLFYIFKNDPDEEMAAFAEADTFFCFVELLSGFRDHFCQQL
DNSVVGIRSTITRLSQLLKEHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLH
IWDTLLSDPEGPQETLLRVCCAMLILIRRRLLAGDFTSILKLLQNYPPTNISHMLYVANK
LRGQPSR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaaaaaagtaccagattggctcaacagctctctctggtccaccactccttcc
gcctcctcctcgtccaccgccaccaccgacaccaatatcttcgaccaccactcacccacc
accgcctctccacccctcgaatccccaatcaatccaccgctacctcctgcggctatcaga
gacgagcaacaacagcagccgccgcgtcatcatcatcctcaaaaacctgagattaaagat
aagctttccaaaagcagcatcgttgacgacgacgacaacaacaatagtattattaatgat
aattatagtgatgataatattattaataataaaataattattactaataatgatattcga
aatgttgatgatgatgagagcgctgcagaggatatttctaagcaggctctgcttctgact
gagctatcaaagaaggtgataaatatgggggaattgagaagaattgcttctcaagggata
cctgatggtgctggtattcgttccacggtttggaagctcttgttggggtatttggcacct
gatcgttcactttggtcgtctgaattggccaagaagagatctcagtacaagcattttaaa
gaggatcttttgatgaatccttcagaaatagcaaggaggttggagaaaaccactgttctc
aacaatgacaatggaaaatctgaaagccgttgtgtactctcaagatcagagataactcat
ggggagcatcctttgagccttggtaagagcagcgtttggaatcaattctttcaggactca
gagatcatagagcagattgatcgagatgtgaaacgcactcatccagacctgcacttcttt
tctggggactcatctcttgcaaaatctaatcaggaggctttgagaaacatactgactgta
tttgcaaagttaaatccgggtatacgatatgttcaagggatgaatgaaattttggcacca
ctattctacatattcaaaaatgaccctgatgaggaaatggcggcctttgcagaagcagac
acatttttctgctttgttgagctgttgagtggatttcgggatcatttctgtcagcaactt
gacaacagtgttgtgggaattcgatcaactattacaagattgtcacagcttctgaaggag
catgatgaagagctttggcgtcatcttgagatcacaaccaaagtaaacccccagttttac
gcatttcggtggattactctgctcctgactcaggagttcaatttcgcagatagtcttcac
atttgggacacacttttaagtgaccccgagggtcctcaggagacattgcttagggtatgt
tgtgcaatgctgattctcattaggaggcgtctactagcaggggatttcacttctattctc
aagctactccagaattatcccccaacaaacattagtcatatgctctatgtcgcaaacaaa
ttgcgtggtcaaccatcacgctaa
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