Populus trichocarpa (black cottonwood): 7492008
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Entry
7492008 CDS
T01077
Name
(RefSeq) ER lumen protein-retaining receptor
KO
K10949
ER lumen protein retaining receptor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7492008
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
7492008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ER_lumen_recept
Motif
Other DBs
NCBI-GeneID:
7492008
NCBI-ProteinID:
XP_002300168
UniProt:
A9P883
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All DBs
Position
1:32637885..32641278
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AA seq
215 aa
AA seq
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MNIFRLVGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFTHYVSFYN
TVMKLIFLGSSFSIVWYIRRHKLVRRSYDKDHDTFRHLFLVLPCLILALLIHEKFTFREV
TWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGAYRALYILNWVYRYFTEPHYVH
WITWIAGTVQTLLYADFFYYYFQSWKNNVRLELPA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattcagattagtaggggacatgacccatctggctagtgtccttgttttgctc
cttaagatccacaccatcaaatcatgtgctggcatttctctaaagactcaggaactctat
gctcttgtttttgccactcgctacttagacatattcactcattatgtctcattttataat
accgtgatgaaattgatattcctgggaagctcattctctattgtctggtatattcgacgc
cacaagttggttcggagatcttatgacaaggaccatgacacctttcggcatttatttctt
gtgctgccctgcctaattttggccttgctaatacatgaaaaatttaccttcagagaggta
acatggacattctccttgtatctggaagctgttgccatacttcctcaactagtactgttg
cagaggacaagaaatattgacaacctgacaggacaatatgtctttctcctaggcgcatac
agagcattgtacatattaaactgggtttatcgctactttacagagccacactatgtccat
tggataacttggatagcaggaactgttcagacattattgtatgctgacttcttctattat
tatttccagagttggaaaaacaatgtgaggcttgagttaccagcttga
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