Populus trichocarpa (black cottonwood): 7492012
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Entry
7492012 CDS
T01077
Name
(RefSeq) probable calcium-binding protein CML22
KO
K13448
calcium-binding protein CML
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7492012
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Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_4
SPARC_Ca_bdg
AIF-1
EF-hand_9
IL1_propep
EF-hand_10
CTK3
Motif
Other DBs
NCBI-GeneID:
7492012
NCBI-ProteinID:
XP_002300172
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Position
1:32574467..32576886
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AA seq
249 aa
AA seq
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MKDSLGTSQPCPSLKSLTSKLGGMFCHCGSPNKYKRLDAKLEKKLIELKRSSSGKTNFKS
MNSIIMRFPQFKEELKHIRGVFEQYDEDANGNIDMEELKKCLQNLQLNLKEEEVEDLFHS
CDIDQSEGIQFNEFIVLLCLIYLLVEHSSSPLRTSKMGSPELEATFDTIVKAFLFLDKNG
AGKLNKKDMIKALNEDSPWEKSPAHITRSRFKEMDWDRNGKVSFREFLFSLINWIGIDAD
EDIPVSTRT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattcacttggaacttctcaaccttgcccttctttgaagtccttgacatccaaa
ctaggagggatgttttgccattgcggatcaccaaacaaatataagaggttggatgcaaag
cttgaaaagaagctgattgaactcaagagaagttcatctgggaagacgaattttaaatca
atgaatagtataatcatgaggtttccccagtttaaagaagaactgaaacacatcagaggg
gtattcgaacagtatgatgaagatgcaaatggtaatattgacatggaggaactaaaaaaa
tgcttacaaaatctgcaactcaatttaaaagaggaggaagttgaggatctattccactcc
tgcgacattgatcaaagcgaggggatacaattcaatgagttcattgttcttctatgtctc
atctatctcctagtagagcattcatcctctccactgagaacgtcaaagatgggttcacct
gagcttgaggccacttttgatacaatagttaaagcattcttatttctggataagaatgga
gctggcaagctgaacaaaaaggacatgatcaaagcattgaatgaggattctccatgggag
aaatccccggcacatatcactagatctagattcaaagaaatggactgggacaggaatggg
aaggtcagtttcagggagttcctcttttctttaatcaactggatcgggattgatgctgat
gaagatattcctgtgagcacaagaacttga
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