KEGG   Populus trichocarpa (black cottonwood): 7492092
Entry
7492092           CDS       T01077                                 
Name
(RefSeq) SKP1-like protein 14
  KO
K03094  S-phase kinase-associated protein 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03083  Polycomb repressive complex
pop04120  Ubiquitin mediated proteolysis
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    7492092
   04120 Ubiquitin mediated proteolysis
    7492092
  09126 Chromosome
   03083 Polycomb repressive complex
    7492092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7492092
   04121 Ubiquitin system [BR:pop04121]
    7492092
   03036 Chromosome and associated proteins [BR:pop03036]
    7492092
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    7492092
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     7492092
   Cul7 complex
     7492092
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     7492092
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     7492092
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF1108
Other DBs
NCBI-GeneID: 7492092
NCBI-ProteinID: XP_002306396
UniProt: A0A2K2AE73 A9PAH7
LinkDB
Position
5:6657940..6658815
AA seq 184 aa
MSSSIDSPTLTTETTQLSPQPDTETAQPTKKITLKSSDNQIFEVEEAVAMEFATVKSFFE
DSPSSTDTVPLPNVTAKPLSQVIEFCKEQIKFKANPDEAQKKKYHSEFLKEKSDKDLVDM
IPVANYLEIKDLLDVLNQAVADRIENKSVEYVRSFFGIDNDFTAEEEAALRQEHAWAYEG
VDED
NT seq 555 nt   +upstreamnt  +downstreamnt
atgtcttcctcgatcgatagtcccaccctgacgaccgagaccacccagctttcaccccaa
ccagacactgaaacagcccaacccaccaagaaaatcaccctcaaaagctctgataaccag
atctttgaagtagaagaagctgtagccatggaatttgcgactgtgaaatctttctttgaa
gactcaccgtcatcgaccgacactgtgccactccctaatgtgacggccaagccactgtcc
caagttatagagttctgcaaggagcaaataaagtttaaagcaaacccagatgaagcacag
aaaaaaaagtaccattcggagtttcttaaagaaaagagtgacaaagatctggtggatatg
attccggtggctaactatttggagattaaagatttgcttgatgtgcttaaccaggctgtt
gctgataggattgagaacaagagtgttgaatatgtgagaagcttctttgggattgacaac
gattttactgctgaagaagaggctgcgcttcgtcaagaacatgcttgggcttatgaaggt
gttgatgaggactaa

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