Populus trichocarpa (black cottonwood): 7492092
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Entry
7492092 CDS
T01077
Name
(RefSeq) SKP1-like protein 14
KO
K03094
S-phase kinase-associated protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03083
Polycomb repressive complex
pop04120
Ubiquitin mediated proteolysis
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7492092
04120 Ubiquitin mediated proteolysis
7492092
09126 Chromosome
03083 Polycomb repressive complex
7492092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7492092
04121 Ubiquitin system [BR:
pop04121
]
7492092
03036 Chromosome and associated proteins [BR:
pop03036
]
7492092
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
7492092
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
7492092
Cul7 complex
7492092
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
7492092
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
7492092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
DUF1108
Motif
Other DBs
NCBI-GeneID:
7492092
NCBI-ProteinID:
XP_002306396
UniProt:
A0A2K2AE73
A9PAH7
LinkDB
All DBs
Position
5:6657940..6658815
Genome browser
AA seq
184 aa
AA seq
DB search
MSSSIDSPTLTTETTQLSPQPDTETAQPTKKITLKSSDNQIFEVEEAVAMEFATVKSFFE
DSPSSTDTVPLPNVTAKPLSQVIEFCKEQIKFKANPDEAQKKKYHSEFLKEKSDKDLVDM
IPVANYLEIKDLLDVLNQAVADRIENKSVEYVRSFFGIDNDFTAEEEAALRQEHAWAYEG
VDED
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcgatcgatagtcccaccctgacgaccgagaccacccagctttcaccccaa
ccagacactgaaacagcccaacccaccaagaaaatcaccctcaaaagctctgataaccag
atctttgaagtagaagaagctgtagccatggaatttgcgactgtgaaatctttctttgaa
gactcaccgtcatcgaccgacactgtgccactccctaatgtgacggccaagccactgtcc
caagttatagagttctgcaaggagcaaataaagtttaaagcaaacccagatgaagcacag
aaaaaaaagtaccattcggagtttcttaaagaaaagagtgacaaagatctggtggatatg
attccggtggctaactatttggagattaaagatttgcttgatgtgcttaaccaggctgtt
gctgataggattgagaacaagagtgttgaatatgtgagaagcttctttgggattgacaac
gattttactgctgaagaagaggctgcgcttcgtcaagaacatgcttgggcttatgaaggt
gttgatgaggactaa
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integrated database retrieval system