KEGG   Populus trichocarpa (black cottonwood): 7492250
Entry
7492250           CDS       T01077                                 
Name
(RefSeq) replication protein A 14 kDa subunit A
  KO
K10740  replication factor A3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03030  DNA replication
pop03420  Nucleotide excision repair
pop03430  Mismatch repair
pop03440  Homologous recombination
pop03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    7492250
   03420 Nucleotide excision repair
    7492250
   03430 Mismatch repair
    7492250
   03440 Homologous recombination
    7492250
   03460 Fanconi anemia pathway
    7492250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pop03032]
    7492250
   03400 DNA repair and recombination proteins [BR:pop03400]
    7492250
DNA replication proteins [BR:pop03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    7492250
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     7492250
   MMR (mismatch excision repair)
     7492250
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     7492250
SSDB
Motif
Pfam: Rep_fac-A_3 MYEOV2
Other DBs
NCBI-GeneID: 7492250
NCBI-ProteinID: XP_002308471
UniProt: A9PE07
LinkDB
Position
6:21873551..21875376
AA seq 107 aa
MDTSKPAIFVNGALLPMHVRKRVRTVIQVVGADRGAVVGKSPDDLQLVVKGSPPSAPLTN
FVEVIGIADSEKSIQAEIWTNFGDAFDTYNYNQLCQLANGEYQHLFL
NT seq 324 nt   +upstreamnt  +downstreamnt
atggatacatcaaaacctgcgatttttgtcaacggggcacttttgccgatgcatgttcga
aagagggtccggactgtgattcaagttgtgggagctgatcgtggagcagtagttggaaaa
tccccggatgatctccagcttgttgtaaaaggctctccgccatctgctcctcttacaaat
tttgttgaggttattggcattgctgacagtgaaaaatcaatccaggctgagatatggacc
aactttggggatgcatttgatacatacaactacaatcagctgtgtcagcttgcaaatggg
gaataccagcacttattcctctga

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