Populus trichocarpa (black cottonwood): 7492260
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Entry
7492260 CDS
T01077
Name
(RefSeq) UDP-glucuronic acid decarboxylase 1 isoform X1
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
pop01250
Biosynthesis of nucleotide sugars
Module
pop_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
7492260
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
7492260
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
Ribosomal_L23eN
Motif
Other DBs
NCBI-GeneID:
7492260
NCBI-ProteinID:
XP_052310186
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Position
6:complement(22030486..22035036)
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AA seq
429 aa
AA seq
DB search
MMKQLHKQTSVNHRREDEIPTSTQSYTPKTLKHPRSISYIFKEQRFLFILVGILIGSAFF
IFQPTLSRLNPSTHSSIPTSIYHRHQDSSSGSSGFASKGSFPGRVPAAIGRKRLRIVVTG
GAGFVGSHLVDKLISRGDEVIVIDNFFTGRKDNLVHLFGNPRFELIRHDVVDPILLEVDQ
IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQK
ETYWGNVNPIGERSCYDEGKRTAETLAMDYNRGADVEVRIARIFNTYGPRMCLDDGRVVS
NFVAQAIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEHVGPFNLGNPGEFTMLELA
EVVKETIDSSATIEFRPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVNDFRNRI
LEGDEGRGL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacaattacacaaacaaaccagcgtgaatcacaggagagaagatgaaatccca
acttcaactcaatcttacacacctaagacactaaaacaccctagatccatttcttatatc
ttcaaagaacaacgctttcttttcattcttgttggcattttaattggttctgctttcttc
attttccagcccactctctcccgccttaatccatctacccattcttctatccccacttca
atttatcatcgccaccaagattcctcatctgggtcctcggggtttgcctcgaagggatcg
tttccaggccgggtcccagctgcgatcgggaggaagaggctgcgtattgtggttactggt
ggggctggatttgttgggagtcacttggtggataaattgatctcgcggggtgatgaggtt
attgtgattgataatttttttactgggaggaaagataatttggttcatttgtttgggaat
ccgaggtttgaattgattagacatgatgttgttgaccctattttgttggaagttgatcag
atctatcacttggcttgtcctgcttctccggttcattataagtacaatcctgtcaagact
attaagacgaatgtgatgggcacacttaatatgttgggtttggcaaagagggtaggggcg
aggtttttgttaacgagtacgagtgaggtttatggcgatccactagagcatccgcagaag
gagacttattggggaaatgtgaatccaataggtgagaggagttgctatgatgaaggaaaa
cggactgcagaaacattagccatggattataatcgaggtgcagatgttgaggtgcgtatt
gctcgcatttttaatacgtacgggcctcgcatgtgcttggatgatggacgtgttgtcagt
aattttgttgctcaggccatccgcaaacaaccaatgactgtatatggtgatgggaaacaa
actaggagcttccaatatgtttctgatctggttgatgggctggtggcactaatggaaggc
gagcatgtgggaccttttaaccttggcaatccaggagagttcactatgctagagctcgca
gaggttgtcaaagagactattgattcaagtgcaacaatagaattcagacccaacactgct
gatgatccacataagaggaaaccagatatcagcaaagcaaaggagttgctgaactgggag
ccaaaaatttctttgagagaaggattgcctctcatggtgaatgacttccggaatcgcatt
ttggaaggagatgaagggagagggctttaa
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