Populus trichocarpa (black cottonwood): 7492286
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Entry
7492286 CDS
T01077
Name
(RefSeq) myosin-15 isoform X1
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7492286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7492286
04131 Membrane trafficking [BR:
pop04131
]
7492286
03029 Mitochondrial biogenesis [BR:
pop03029
]
7492286
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7492286
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7492286
mRNA cycle factors
P-body specific factors
7492286
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7492286
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7492286
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7492286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Zeta_toxin
Flp1_like
AAA_22
TSC22
TRPM_tetra
ABC_tran
AAA_lid_6
Motif
Other DBs
NCBI-GeneID:
7492286
NCBI-ProteinID:
XP_002309460
UniProt:
A0A2K2A649
LinkDB
All DBs
Position
6:complement(22518123..22537288)
Genome browser
AA seq
1522 aa
AA seq
DB search
MPEPKMNLRKGSKVWAEDKNLAWVAAEVTDFLAKKVQILTVTGKQVLTVPEKLCPRDADE
EEEHGGVDDMTKLTYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMM
EQYKGAPFGELSPHVFAVADASYRAMMSEGRSQSILVSGESGAGKTETTKLIMQYLTFVG
GRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDATGRISGAAIRTY
LLERSRVVQITDPERNYHCFYQLCASERDAEKYKLDNPHHFHYLNQSKTYELDGVSNAEE
YIKTRRAMDIVGISNEDQEAIFRILAAILHLGNIEFSPGKEHDSSTVKDEKSSFHMQMAA
DLFMCDANLLFATLCTRTIQTREGNIIKALDCNAAVASRDALAKTVYARLFDWLVEKINR
SVGQDPTSLIQVGVLDIYGFECFKYNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRKEE
INWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQNFRAHPRLEKA
KFSETDFTVSHYAGKVTYQTDTFLDKNRDYVVVEHCNLMLSSKCHFVAGLFPLPPEESSR
SSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSMNRPQKFENLSILHQLRCGGVL
EAVRISLAGYPTRRSYTEFVDRFGLLAPEFDGSCSYDEKTWTKKILHKLKLDNFQLGRTK
VFLRAGQIGILDLRRAEVLDGAAKRIQRQLHTFIARRDFFSTRAAAFAIQSYCRGCLARK
MFAAKRERAAAISIQKYVRKWLLRRAYLKLLSAAIFMQSNIHGFLTRKRFLQEKKQRAAT
LIQARWKIYKFRSALRHRQASIIAIQCRWRQKLAKRELRRLRQEANEAGALRLAKTKLEK
QLEDLTWRLHLEKRLRVSNDEAKSVEISKLRNTVSSMSLELDAAKFATINECNKNAVLLK
QLELTVNEKSALERELVVMAELRKENALLKSSLDALEKKNSAIELELIEAQTNGNDTTVK
LQEIEEKCSQFQQTVRSLEEKLSHLEDENHVLRQKALTPSSKSNRPGFVRAFSEKYSSAL
ALAHSERKSAFESPTPSKLIVPSMHGLSESRRSKFTAERHQENYEFLSKCIKEDLGFIDG
KPLAACIIYRCLLHWHAFESERTAIFDYIIEGINEVLKVGDENITLPYWLSNASALLCLL
QRNLRSNGFLTAAVPSSTSSGLSGRVIHGLKSPFKIMGYEDGLSHVEARYPAILFKQQLT
ACVEKIFGLIRDNLKKELSPLLGLCIQAPKSARHAGKSSRSPGGIPQQAASSQWESIIKF
LDSLMDCLRENHVPSFFIRKLITQVFSFVNISLFNSLLLRRECCSFSNGEYVKSGLAELE
KWIVVATEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLQEIMQDLCPALTVRQIYRISTM
YWDDKYGTQSVSNEVVAQMREMLNKDNQNMTSNSFLLDDDLSIPFSTEDIDMAIPVIDPS
SVELPKLLTEHPCAQFLVLCQT
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccaagatgaatctgcggaaaggctcaaaagtatgggccgaagacaagaat
ttggcatgggttgctgctgaagtaacggatttcttggccaaaaaagtgcaaatccttact
gttactggaaaacaggttttgactgtgcctgagaaattgtgtccgagagatgcagatgaa
gaggaggagcatggaggtgttgatgatatgactaaattgacttacttgaatgagcctgga
gtgctttataatcttcaaagaagatatgctcttaatgatatttatacgtacacgggaagc
attttaatagcggttaatccattcaccaagcttcctcatctgtacaacgtgcatatgatg
gagcaatataagggagctccatttggtgagctaagtccccatgtttttgctgtggcagat
gcatcatacagagctatgatgagtgaaggtcgaagccaatctatactggttagtggagaa
agtggggctgggaaaactgagacaacaaaattgattatgcaatatctcacttttgttggt
ggccgagctgctggtgacgacagaacagttgagcagcaagtccttgaatcaaatccactc
ttggaggcatttggtaatgcaaggactgttagaaatgacaactcaagtcgctttggcaag
ttcgtcgagatccagtttgatgcaactggcaggatatccggtgctgcgattagaacttac
cttctggaacgatctcgtgtagttcaaataacagatcccgaaaggaattatcactgtttt
tatcaattgtgtgcatctgagagggatgcagagaagtacaaactggataacccgcatcac
ttccattacttaaatcaaagtaagacatatgaattagatggggtgagcaacgcagaagaa
tacataaagacaaggagggcaatggatattgttggtataagcaatgaagatcaggaagct
atatttcgcatcttggctgcaattttgcatcttgggaatattgaattttctcctggcaag
gaacatgattcttccactgtaaaggatgaaaaatctagctttcacatgcaaatggcggct
gatctttttatgtgtgatgcaaacctcttgtttgcaacattgtgtactcgtacaattcaa
acccgtgaaggaaatattataaaagctcttgactgtaatgctgctgttgctagtcgagat
gccctggcaaagactgtttatgctaggctgtttgattggcttgttgagaagattaatagg
tctgtcgggcaggatccaacttccctgatacaagttggagtattggacatttatggcttt
gaatgcttcaaatataatagttttgagcagttttgcattaactttgcaaatgaaaaactt
cagcaacatttcaatgagcatgtgttcaagatggagcaggaggaatatagaaaagaagaa
attaattggagctacattgaatttattgacaatcaggatgttctggatttaattgaaaag
aaacctattggaataattgctcttttggatgaagcttgcatgttcccaaaatcaacacat
gaaactttttcaaccaagctatttcagaatttccgggcccacccaaggctggaaaaggca
aaattttcagaaacggattttaccgtttcacattatgctggcaaggttacttatcaaaca
gacacctttttagataaaaatcgtgattatgttgttgtagaacattgcaatctcatgttg
tcttcgaaatgtcactttgttgctggtcttttccctttgcctcctgaggaatcttcaaga
tcttcttacaagttttcatctgtggcctcaagatttaagcaacaacttcaggctcttatg
gagacccttaattcaacagagcctcattatatacgttgtgtgaagccgaactctatgaac
cgacctcagaaatttgagaatttgagcatcctacatcaacttcgctgtgggggtgtgctg
gaagctgttcggataagtctcgcaggttatcccactcgaagaagctacacagagtttgtg
gatcggtttggactattagctcctgaatttgatggaagttgcagttatgatgaaaaaact
tggacaaagaaaattctgcacaagttaaagctcgacaattttcagctaggtaggaccaaa
gtgtttctcagggctggtcagattggcattttagacctgcggcgggctgaggttctggat
ggtgctgcaaagcgtattcagcgtcaattgcacacatttattgcacgccgagattttttc
tcaacacgtgctgctgcgtttgcaattcaatcatattgcagaggatgccttgctcgaaaa
atgtttgctgcaaaacgagagagagcagctgccatttccatacagaagtatgtccgcaag
tggctattaaggcgtgcttatttgaaactgctctcagctgctattttcatgcagtcaaac
atacacggtttcctgactcgcaaaagatttctgcaagaaaagaagcagagagctgccacc
ctaattcaggctcgttggaagatttacaagttccgctcagctttgcgacatcgccaggct
tctatcatagcaatacagtgtcgttggaggcaaaagctggcaaaaagagagctccgaagg
cttagacaagaggctaatgaagcgggtgcgttgcgtttagctaagactaaacttgagaag
cagttagaagatctcacatggcgattgcatctagaaaaaagattgcgggtatcaaatgac
gaggctaaatcagttgaaatttccaagcttcgaaatactgtgtcatctatgagccttgag
ttagatgcagctaagtttgctactatcaatgaatgcaacaaaaatgcagtattgctaaaa
caattagaattgacagtgaatgaaaaatcagctttggaaagagaactcgtagtgatggct
gaactgagaaaagaaaatgctttactaaagagttctttggatgccttggaaaagaaaaac
tctgctattgagcttgagcttattgaagctcaaacgaatggtaacgataccactgtgaag
ttgcaggaaattgaagagaaatgttctcagtttcaacaaactgttcgaagtcttgaggag
aagctttctcatttggaagatgagaatcatgtccttcgacaaaaagctttgaccccatcc
tcgaagagcaatcgccctggttttgtgagggcattttctgaaaaatactctagtgcgcta
gctcttgcccactctgagcggaagtctgcatttgaatctcctacaccatcaaaacttatt
gtgccttccatgcatggtttgtcagaatcacgtcgatcgaagtttacagctgaacgtcac
caggagaactatgaattcctctcaaaatgcatcaaagaagatttgggttttattgatggc
aaaccactagcagcttgtatcatatacagatgtcttcttcactggcatgcctttgaatct
gagcgcacagccatttttgactacattattgaaggaataaatgaagttctgaaggttggg
gatgagaacattacgttaccatattggctgtcaaatgcctcagcactactttgccttctc
cagaggaacttaaggtcaaatggctttttgactgcagctgttccatcttctacatcttct
ggattatcagggagggtcattcatggtcttaaatctcctttcaaaatcatgggatatgag
gatggtctgtcacatgtggaagcaagatatccagcaatactatttaaacaacaactaact
gcatgtgtggagaagatttttggcttgattagagacaacttgaagaaagaattatcacca
ctgctgggtttatgtattcaggcacccaaatctgcacggcatgctgggaaatcatcaaga
tcacccggtggcattcctcagcaagcagctagtagccaatgggagagcattattaaattt
ttggattctctcatggactgtttacgtgagaatcatgtaccatctttcttcatccgtaag
ctcatcacccaggttttctcttttgtcaatatatccctttttaacagccttctactacga
cgtgaatgttgctcgttttcaaatggggagtatgtgaaatctggtctagcagaactggag
aaatggatagtggttgcaacggaggagtatgcaggaacatcttggcatgagctaaattat
attagacaagctgttgggtttctggtaattcatcagaagagaaaaaagtctcttcaagaa
atcatgcaagatctgtgtccagcattgaccgttcgccaaatctatcgtataagtaccatg
tactgggatgataaatatggcactcagagtgtgtcaaatgaggtggttgcccaaatgaga
gagatgttgaacaaggacaatcagaatatgacctcaaactctttcttgttggatgatgac
ctcagcattccattctctactgaggatatagacatggcaattcctgtaatagatccttcc
agcgttgaactcccaaagttgttgacagaacatccttgtgctcagtttctggtcctatgt
caaacgtaa
DBGET
integrated database retrieval system
