Populus trichocarpa (black cottonwood): 7492397
Help
Entry
7492397 CDS
T01077
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7492397
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7492397
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7492397
04121 Ubiquitin system [BR:
pop04121
]
7492397
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
7492397
Peptidases and inhibitors [BR:
pop01002
]
Metallo peptidases
Family M67
7492397
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
Others
7492397
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
7492397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
7492397
NCBI-ProteinID:
XP_002315693
LinkDB
All DBs
Position
10:7220714..7224734
Genome browser
AA seq
236 aa
AA seq
DB search
MTQTDSKCEHITVHTVTQTSPCPILSCVEKAPKYAHVSLIPVADSDQSSCNQPSASGVLQ
DVHISPLLMEDFLELARENTEKDLETCGVLGAFLEHGTYYVTTLIIPKQDSTSSSCEALK
EEEFFAIQNERSLFPVGWIHTHPSQSCFMSSIDLHTHFSYQAMVPEAFAIVMAPTDQSRS
YGIFRLSDPGGMSVLKECEESGFHPHGEPADGSPIYEHCANVFTNTNLRFEIFDLR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacagacagcaaatgtgagcatatcaccgttcacactgttactcagacttct
ccatgtcctatactctcatgtgtagagaaagcacctaaatatgctcatgtttcacttata
ccagttgctgattcagatcaaagctcatgcaatcaaccatcagcatccggggtcttgcaa
gatgtacacatatcgccactgttgatggaggattttcttgaacttgctagagaaaacaca
gagaaggatcttgaaacatgtggggttcttggtgctttccttgagcatggaacctattac
gtcaccactctaataataccaaaacaagattcaacttcctcttcttgcgaggctttaaaa
gaggaagagttttttgccatacagaatgaacgttctctttttcctgttgggtggattcat
acacatccttctcaaagctgtttcatgtcatcaattgacctacatactcacttttcatat
caggcaatggtacctgaggcatttgccattgtcatggctccaactgatcagtcaaggagc
tatggaatattcaggttatctgacccaggtgggatgagtgttctgaaagagtgtgaagag
tcagggtttcatcctcatggagaaccggcagatgggagccccatttacgagcactgcgcc
aatgtattcacaaatactaatctgaggtttgaaatctttgacttacgctga
DBGET
integrated database retrieval system
