Populus trichocarpa (black cottonwood): 7492402
Help
Entry
7492402 CDS
T01077
Name
(RefSeq) ubiquitin-like-specific protease 1D
KO
K16287
ubiquitin-like-specific protease 1C/D [EC:
3.4.22.68
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7492402
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
7492402
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
7492402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Motif
Other DBs
NCBI-GeneID:
7492402
NCBI-ProteinID:
XP_024467076
LinkDB
All DBs
Position
10:7109053..7121233
Genome browser
AA seq
557 aa
AA seq
DB search
MGEEKSKKRPLDLDSNWDVIMGRDDGEPPPLVIVKNTPQPQPQPTPSQREDFASISDKKL
EEQIERNKIHVMKLGPTLPDKGQKLQLTIKAMEEELDQRKHRRPAQMDVAECEKHRNSTA
SNGFGQKDASSSQVKNSKSQFSTIFSRKMEENTDCRVGNAFDKELTTLGHCNRQNMRSNG
RSGKKRKQNIQSSSRQLPFQFATRVSLNGERRGPANGDQKGKASSAHLLHHNSENFSTNS
SKKKDDCRVLPSNGSRPRKDPTVVVLDEDEPQLGTTELAKELAEHMKDAKISYPSRDDPA
SVEIAYKDMDCLAPEAFLTSPIMNFYIRYIRLQASPANKATCDYHFFNTFFYKKLEQAIS
YKGSDKESFFVKFRRWWKGVNIFEKAYILIPIHDDLHWSLVIICFPDKKDESGPIILHLD
SLGFHCSSTVFSNIKSYLKEEWRYMNQEVPTDFPIPDRIWKHLDRRIEDKIIAVPQQKND
YDCGLFVLFFMERFIQEAPERLKKRDLAMFGKKWFRPEEASDLRKKIRAILMDEFQNAFK
SGHISDSSSLSSGGDPP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagagaagtcaaagaagagaccactggacctggactcaaactgggacgtgatc
atgggcagagacgacggcgaaccaccgccattagtgatcgtgaaaaacacgccacaaccg
caaccacagcccacgccgagtcagagagaggactttgcttcaatctccgataagaagctg
gaggaacaaattgagagaaacaaaattcatgttatgaagttaggccctacattgcctgac
aaaggacagaagcttcaacttactattaaggccatggaagaagagcttgatcaaagaaaa
catcgtcgccctgcccaaatggatgttgctgaatgtgagaagcacagaaactcaacagct
tcaaatgggtttggacaaaaggatgcatcatcatctcaagtcaaaaattcaaaatcccaa
ttttccactatttttagtagaaagatggaagaaaatacagattgtagggtaggtaatgca
ttcgataaagaattgacgaccttgggtcactgtaatcgccaaaatatgagaagtaatgga
aggtcagggaaaaagagaaaacagaacatacagtcatcatcaagacagttgccttttcaa
tttgctaccagggtctctcttaatggagaaagacgtggacctgctaatggtgatcaaaag
ggtaaagcttcttctgctcatcttttacaccacaacagcgaaaatttctccaccaattcc
tccaagaagaaggatgattgccgagtcctgccttcaaatggttcaaggcctaggaaggat
ccaacagttgttgtcctagacgaagatgaacctcagctagggacaacagagctagcaaaa
gaattggctgaacacatgaaggatgctaagatctcttatccatcaagagatgatccagca
tctgttgaaattgcttacaaggatatggattgccttgcccctgaagcttttttgacatcg
cctattatgaacttttacatcagatatatacgtctgcaagcatctccagcaaataaggcg
acgtgtgattatcacttttttaacacattcttttacaagaagctggaacaggccatatca
tataaggggagtgacaaggaatcattttttgtcaagttcagaaggtggtggaaaggtgtc
aatatatttgaaaaggcttacatacttattcccatacatgatgatcttcattggagcttg
gtgattatatgtttcccggataagaaagatgaatcaggaccaattattcttcatttagat
tcattgggatttcattgtagcagtacagtattttctaacattaaaagttatttgaaagaa
gaatggaggtatatgaatcaagaagttcctacagattttccaattccagatagaatatgg
aaacatctagatcgtagaattgaggacaaaatcattgcggtgccccagcagaaaaatgac
tatgattgtggcctctttgtacttttcttcatggagcgcttcattcaagaggctcctgag
aggctgaaaaagagagatctggcaatgtttggcaagaagtggttcagacctgaagaggcc
tctgatttaagaaagaaaatcagggctatacttatggatgagtttcaaaatgcgtttaag
agtggtcatatttcagactcttcttctttgtcttcaggtggggatcctccctaa
DBGET
integrated database retrieval system
