Populus trichocarpa (black cottonwood): 7492443
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Entry
7492443 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7492443
KO
K14574
ribosome maturation protein SDO1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7492443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7492443
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
7492443
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GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
zf-met
HTH_70
DUF5677
C2H2-zf_KIN17
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
7492443
NCBI-ProteinID:
XP_002306675
UniProt:
B9H7M9
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Position
5:19420510..19423078
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AA seq
357 aa
AA seq
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MSVKLQQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHHTVY
SNVSKGILAKSLDLNKAFGHDDQTRICLEILDKGELQVAGKERESQLSSQFRDIATIVMQ
KTINPETQRPYTISMIERLMHETHFAVEPHNSSKKQALDVIRELQKHFPIKRSPMRLGLT
VSGQNFSTLLEKLGAWDANVVSKDESGSRQSIICEMDPGFFRDCDTLVRNLQGRLEILAV
SVHFEEDTHVDDYDDYEDVPSALPKGSTDSAVQLSEKIQKQTLSDEKKAGAEVKQNRCST
CNVSVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTSEECLGDMDMNDSNTDIKEYSF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaagttgcagcagccggtagggcaaaaacggctgacgaacgtagcagtggtc
cgattaaagaagcatggtatgcgtttcgagattgcttgttacaagaacaaggtcctctct
tggcgctctggcgtagagaaagatttggatgaagtgctgcagtcccaccacacagtttat
tcaaatgtttccaaaggaattcttgcaaaatctttagatttgaataaagcttttggacat
gatgatcagaccagaatttgcctcgagatattggacaaaggggagcttcaagtggccggg
aaagagagggaatctcagttgtctagtcagtttcgggatatcgcaactattgttatgcag
aaaactattaatcccgaaacccaacgtccttacactatcagtatgattgagagattgatg
catgaaactcactttgctgttgaaccgcataacagctctaagaagcaggcgctagatgtt
attcgtgagcttcaaaagcattttccaatcaagcggtctccaatgagacttgggcttact
gttagtggacagaatttttctactctattggaaaagcttggtgcctgggatgctaatgtt
gtttcgaaagatgaatctggaagtcgtcaatctattatttgtgaaatggacccaggtttc
ttcagggactgcgataccttggtgaggaatctgcagggcaggctggaaattcttgcggtg
tctgttcattttgaggaggacacccatgtagatgactatgatgactatgaagatgtgccc
tcagccctacccaagggatctactgattctgctgtacaactgagtgagaaaatccaaaag
cagactctctctgatgaaaagaaagctggggcggaggtaaagcaaaacaggtgcagcacg
tgcaatgtgtctgttggggatgcaaagcagttcagggatcacttcaagagcgactggcac
aaacataatttgaagcgcaagaccaagcagctgcctcctcttacttcagaagagtgtttg
ggtgacatggacatgaatgactcgaacacagatataaaagaatactcgttttga
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