Populus trichocarpa (black cottonwood): 7492458
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Entry
7492458 CDS
T01077
Name
(RefSeq) protein NODULATION SIGNALING PATHWAY 2
KO
K27745
protein nodulation signaling pathway 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7492458
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7492458
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
7492458
NCBI-ProteinID:
XP_002306689
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Position
5:19802483..19803871
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AA seq
462 aa
AA seq
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MNCEQAPLIYYNTELQCNLEIASAFPTEKDNLDTDQFIESLLQMEADGMDEAGINNRCGS
HTSTSSVNQESGSLVTSIDETVHFVGFQESNGSNTFTDFLLTGAQAVEVSNWHLASNIIA
GISELLLSQTDENLFSDMVFYFTQGLSYKCRDTPALALHEIVHAQNETMSHFQMLKELSP
YVRFAQFTANQAILEATREENEVHILDLDIMDGIQWPPLMADLAQRNNVSLRITAIVGDP
EKAALVQHTGRRLVEFAESVGQTFKFDQMTIEKEEDFEKIEGGHTLIANCMIHQLHMTDR
NLLVVKNFLSGVSRLSPKLVVLVEEELLNFLKVSSVSFVEFFREAIQHYTALSDSLQYSY
GRVGFELFQKETMGLRIMDSVRSFPIGREEKMSWEESFSLLKNFKPIPMSATNVSQAKQL
SGLLGIGYWVQNENSRLSLCWKSRPLTTASSWIPRHALGSRH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgagcaagctcctcttatctactacaatactgaactgcaatgcaacctcgaa
attgcttcagctttcccaacagaaaaggacaacctggacaccgatcagtttatcgaaagc
ttacttcaaatggaagctgatggcatggatgaagccggtattaataacagatgtggcagc
cacacatcaactagttctgtgaatcaagaaagtggcagcttggttacttccatagatgaa
actgtgcattttgtcggctttcaggagagtaatggtagcaataccttcactgattttctg
ttgacaggagcccaggctgttgaagtatcaaactggcatcttgcttcaaatataatcgca
ggaatcagcgaattacttctaagccaaactgacgagaatctgttcagtgatatggttttt
tatttcactcaagggctctcctacaaatgcagagatactccagcattagcattacatgag
attgttcatgcacagaatgaaaccatgtctcacttccagatgctcaaagagctctcccca
tatgtgaggtttgcacaattcactgcaaaccaagcgatccttgaggcaaccagagaggaa
aatgaggttcatatcctggatcttgacatcatggatggaattcaatggccaccactaatg
gcagatcttgcacagaggaataatgtttctctgagaataactgcaattgttggcgaccca
gagaaagcagctcttgtacaacatacgggcagaagactggtcgagtttgcagaatcagta
ggtcaaacgttcaagtttgaccaaatgactatcgagaaagaagaggactttgaaaaaatt
gaagggggccatacactgatagcaaactgcatgatccatcagcttcacatgactgacagg
aaccttttggttgtgaagaatttcttgagtggcgtgagtagactatccccaaaactggtg
gttttggttgaagaagaactcttaaattttcttaaggtttcatctgtgtcctttgtagag
ttttttcgcgaggcgatccaacattacactgcactttctgattctctacaatatagctac
ggaagagtggggtttgaactatttcaaaaggagaccatggggcttaggattatggatagt
gtaaggagttttccgattgggagagaagagaaaatgtcgtgggaggaaagcttttctttg
ctgaagaatttcaaaccaatccccatgagtgccaccaatgtttctcaagccaagcaattg
tcaggtctccttggtatagggtactgggtgcaaaatgaaaattcaaggttgtctttgtgt
tggaaatcaaggcctctaacaactgcttcctcttggattcctagacatgctctaggaagt
cggcattga
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