Populus trichocarpa (black cottonwood): 7493231
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Entry
7493231 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7493231
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
7493231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
7493231
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
7493231
DNA repair and recombination proteins [BR:
pop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
7493231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
7493231
NCBI-ProteinID:
XP_024452415
LinkDB
All DBs
Position
3:complement(18771572..18775302)
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AA seq
354 aa
AA seq
DB search
MSGGPPRVRAMNSIREPENKEPEKPATKKKPTNEKQPPQETESNNKSKKKGGSGKFVVLR
QKSMNASCSSYASSESSSPLSRASSSSSSWSSGRTAVRRNAVMVRKKQCGGGGENEVLVG
DNSTDDFQLQIKKRCAWVTPTTDPSYATFHDEEWGVPVHDDKKLFELLSLSGALAELTWP
LILNKRHIFREVFLDFDPIDVSKLNEKRIAMPGSPASSLLSELKLRSIIENARQICKVTD
EFGSFDKYIWNFVNHKPIISQFRYSRQVPVKTPKAELISKDLVKRGFRSVSPTVIYSFMQ
VAGLTNDHLINCFRFQECTTKGEARVKDDYLEAKTEVKELEDPIDVGLSRAVDD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcccacctagagtgcgggccatgaacagcatcagagaaccggaaaacaag
gaaccagaaaagccggcgacgaagaagaaacccaccaacgagaaacagccgccgcaagaa
acggagtccaacaacaagagcaagaagaagggtggcagtggcaaattcgttgttttgaga
caaaagtccatgaatgcttcctgctcctcctacgcctcgtcggaatcctcgtcgccgctt
agccgggcgtcttcgtcttcctcgtcgtggtctagtgggagaacggcggtaagaaggaac
gcggtgatggtaaggaagaagcaatgtggtggtggtggtgagaacgaagtactggtgggg
gataatagcaccgatgactttcaacttcaaattaaaaaaagatgtgcttgggttacacct
actactgatccaagctatgccacttttcatgatgaagaatggggagtcccggtccatgat
gacaagaagctgtttgaactgctaagcctatcgggtgctttggctgaacttacatggcct
ctcattcttaacaaaaggcatatatttagggaagtctttttggattttgatccaattgac
gtttccaaattaaacgagaaaaggatagcaatgccaggaagccctgccagctccctactg
tcagagctaaagctccgatcaatcattgagaatgcacgtcaaatttgcaaggtcacagat
gagtttgggtcgtttgataaatacatctggaactttgtgaatcataagcccatcataagc
caattccgatattcccgccaagtcccagtcaagactccaaaagcagagctcataagcaaa
gacctggtaaaaagagggtttcgaagcgtcagtccaacagtcatatactcattcatgcaa
gtggctggactaacaaatgatcatctcataaattgctttagattccaagagtgtacaacc
aagggagaagcaagggtaaaggatgactatcttgaggctaagaccgaagtgaaagaactt
gaggatccaatagatgttggattatctagagctgtcgatgactag
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