KEGG   Populus trichocarpa (black cottonwood): 7493232
Entry
7493232           CDS       T01077                                 
Name
(RefSeq) ABC transporter C family member 13 isoform X1
  KO
K05674  ATP-binding cassette, subfamily C (CFTR/MRP), member 10
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pop00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    7493232
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pop02000]
    7493232
Transporters [BR:pop02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    7493232
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N MMR_HSR1 Dynamin_N AAA_29 AAA_23 AAA_16 RsgA_GTPase nSTAND1
Other DBs
NCBI-GeneID: 7493232
NCBI-ProteinID: XP_052307504
LinkDB
Position
3:complement(18786866..18801771)
AA seq 1449 aa
MEFKKSLYCPNSPFVWEGNTFSECFDNLVPGFGANVVTIVIILVLAITRSTASRVPRISC
TEKTVFRFLPFLGALVSFMDLILLVNKELHGNFIAYHEWLFRSSQLIVWTVIIISSMCAC
LHDVFCNRFLCFWWIMKSLLGILHLHRAFGSMEVVKCLKDSCVVLLDVMFGISINIIRIK
RASPKSSSMEDPLLSVDTDIEEGFHGDSGNAKSYWDHMTFRTITSVMNHGVIKQLGFDDL
LSLPNDMEPSTCHDKLSSCWRVQLSSPNPFFFKAIFCAYGWPYLCLGLLKVFNDFIGFAG
PLLLNKLIRFLQQDSMRWDGYLLALSLGLTSILKSFFDTQYSFHLGKLKLKLRSSIMTVI
YQKVLCVTQSERSKFSEGEIQTFMSIDADRTVNLCNSFHDMWSLPLQIGVALYLLYTQVK
FAFLSGLAITILLIPVNKWISELIASATEKMMKQKDERIRRTGEILTHIRTLKMYGWEHL
FSSWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSVFTFGLFTLMGHQLDAATVFTC
LALFNNLISPLNSFPWVINGLIDAFISTRRLSRFLCCSEYKHVLKCKAECEDMAVIVDDA
SCTWSSSEEKQPNLVLNHVNLCLSKGSLVAIIGEVGSGKSSLLSAMLGEMTLIHGSVHSS
GSVAYVPQVPWIMSGTIRDNILFGKNYDSRRYSDTIRVCALDVDISLMAGGDMAHIGSKG
INLSGGQRARLALARAIYQGLDTYMLDDVLSAVDAQVARWILHNAILGPFMDQKTRILCT
HNVQAISSADMVVVMDKGQVTWVGSSVDLAVSSYPAFSPQNEFDALSDVQGKELSMADSI
QVSHSHLPERESNHVSEEVQEIVEAESRKEGRVELAVYKNYAAFSGWFITVVIFLSAILM
QASRNGNDLWLSFWVDTAGSSQIEYSISFYLVVLCIFCIINSALTLVRAFSFAFGGLRAA
VQVHNTLLNKLIDAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIA
VILSYVQVFFLLLLLPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYATFTETLDGASTI
RAFKSEDFFMEKFIEHVTLYQRTSYSEIIASLWLSLRLQLLAAVIISFVAMMAVIGSHDY
LPISFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEELRGSQ
SLNLDWPFQGTIEFQNVTMRYMPSLPPALRGISFTVPGGMKVGVVGRTGAGKSSILNALF
RLTPICSGCIVVDGLDITDVPVRDLRPRFAVVPQSPFLFEGSLRDNLDPFQMNNDLKIWD
ILEKCHVKEEVESAGGLDIHVKESGSSFSVGQRQLLCLARALLKLSKVLCLDECTANVDT
KTASILQSTIFSECRAMTVITIAHRISTVLNMDNILVLDRGNLVEQGNPKALLQDESSIF
SSFAKASTM
NT seq 4350 nt   +upstreamnt  +downstreamnt
atggagttcaagaagtccctctattgccctaattctccctttgtatgggagggaaacaca
ttctcggagtgttttgataatttagttccaggattcggtgcgaacgtggtgaccattgtt
ataattttggtgcttgcaattactcgaagcactgccagtcgagttcccaggataagttgt
acagaaaagactgtttttcgttttcttcctttcctgggagcacttgtctcatttatggac
ttgattttgcttgtgaataaagaacttcatggaaactttattgcatatcatgagtggctt
ttcagaagttctcaattgatagtctggacagttatcataatatcatctatgtgtgcctgc
ttacatgatgttttttgcaaccggttcctatgtttctggtggatcatgaaatcactatta
ggaatccttcatctgcatagagcatttggttcaatggaggtcgtgaaatgccttaaagac
agttgtgttgttttgttagatgtcatgtttggcatatccatcaacattatcaggataaaa
cgggcatctcccaagagcagttcaatggaagatccacttctttctgtggacacagacatc
gaggagggttttcatggagactctggaaatgctaagagctattgggatcacatgacattc
agaactatcacttctgtgatgaatcatggagtcataaagcagcttggatttgatgattta
ctttcgctacctaatgacatggagccttctacctgtcatgataaattgtcaagctgctgg
agagttcagctgagcagtcctaaccctttcttctttaaagcaatcttttgtgcatatgga
tggccgtatctttgtcttggtctgcttaaggtgttcaatgactttattggttttgcggga
ccactgcttcttaataagctcattcggtttcttcagcaagattctatgcgatgggacggc
tatcttcttgcattatctttgggcctcacctctatcttaaaatccttttttgatacacaa
tactcgtttcatcttggaaaattgaagctaaagctacgatctagtatcatgacagtaatt
tatcagaaggtcctatgtgttacccaatcagagcgatcgaaattttctgagggggaaata
cagacatttatgtcaatagatgctgatcgaactgtcaacttgtgtaacagtttccatgat
atgtggagcttgcctttgcaaattggagtggcactgtatcttttgtatacacaagtcaag
tttgcctttctttctggactggccataaccatccttttgataccagtgaataaatggatt
tctgaattgattgcaagtgctactgagaaaatgatgaagcaaaaagatgagaggattaga
aggacaggagaaatcttgactcatattcgaactttaaagatgtatggctgggagcatctt
ttctctagctggctgatggagactagatcctcagaagtcaagcacttagctacacgaaaa
tatttggatgcctggtgtgtattcttttgggccacaacaccaactcttttctctgtattc
acttttggactttttactttgatggggcatcaacttgatgctgcaacggtcttcacttgt
ctggctctgtttaataatttgatctctcctcttaattcattcccatgggtcattaatgga
ttaattgatgcctttatatcaactagacggttgagcaggttcctctgctgttcagaatac
aaacatgtactcaaatgcaaagctgagtgtgaagatatggctgtcatagtggatgatgct
tcttgtacttggtcaagcagtgaagaaaagcaaccaaacctggtgttgaatcatgtgaat
ctgtgcctttcaaagggttcattggttgcgataattggagaggttggttcaggtaaatca
tccttgttaagtgcaatgctaggagaaatgacgctcatccatggatcagttcattcaagt
ggatctgtagcatatgtaccacaggttccgtggattatgtctggaacaatacgtgacaat
attttgtttgggaaaaattatgattcaagaagatattcagatacaatccgggtctgtgca
ttagatgttgatatttcactaatggctggaggtgacatggctcatattggatctaaagga
attaacttatctggtggacagagagctcgtcttgctttggcaagggccatttatcaaggg
ttggacacatatatgcttgatgatgtgctcagtgcagtcgatgcacaagttgctaggtgg
atcttacacaatgctattcttggtccttttatggaccaaaagactcgtattctttgcacc
cacaatgtacaggcaatttcttctgctgatatggttgttgtaatggataaaggacaagtg
acatgggttggaagttcagttgacttggcagtttcatcatatccagcattttctccccaa
aacgaatttgatgcactctctgatgttcaagggaaagaactgagcatggctgattctatt
caagtcagtcatagtcaccttcctgagagggagtctaatcatgtttcagaggaagtacaa
gagatcgttgaggctgagtcacggaaagagggcagagttgaacttgctgtatacaagaat
tatgcagcattttctggttggttcatcacagttgtaatatttctctcagctattctaatg
caagcttctcgtaatggaaatgatctgtggctgtcattttgggttgacacggcagggagc
agtcagatagagtactcaatttccttttacctggttgtactctgtatattttgcattata
aattctgctctaacattggtaagagcattctcctttgcgtttggtgggttacgtgctgca
gttcaggtgcataatacattgcttaataagcttattgatgcacccgtacaattctttgat
caaacaccaggtggaagaatacttaacaggttttcttcagatctctacacaatagatgat
tctcttcccttcatcctcaacattctccttgccaattttgttggcctgttgggaatagca
gtaattttgtcatatgtgcaggtcttcttcttgcttctgctattgccattttggtttatc
tacagcaagctacagttcttttacagatcaacatcaagggaactgcgaaggctggacagt
gtttcacgttctccaatatatgcaaccttcacagagacactcgatggagcatccaccatt
agggcattcaagtctgaggactttttcatggagaaatttattgagcatgtgactttgtat
cagcgaacatcttactcggagataatagcaagtttgtggctttccctgcgtctccagttg
ttagcagcagttatcatctcatttgttgccatgatggctgttattggatctcatgactat
ttaccaatcagctttggcacccccgggctggtaggtttggctctctcatatgcagctcca
atcgtgtctctattaggaagtttcttaacaagttttactgaaaccgagaaggaaatggta
tctgttgagagagctcttcagtatatggacattccccaagaagaactcaggggatctcag
tctctgaatctagactggccatttcaaggaacgattgagtttcagaatgttacgatgaga
tatatgccgtctttgccacctgcactacgtggaattagttttacagttcctggagggatg
aaggttggagttgttgggagaacaggtgctggcaaatctagtattttgaatgcccttttt
cgcctaactccaatatgcagtggttgtattgtcgtggatggccttgacataactgatgtt
cctgttagagatctccgtccacgctttgctgttgttcctcagagtccattcctatttgaa
gggtcattaagggataacctagatccattccagatgaataatgacttgaaaatctgggat
attctggagaaatgccatgtcaaagaggaagtagaatcagcaggcggactggatatccac
gtaaaggaatctggatcatccttttctgttgggcaaaggcagctcctttgccttgcacgc
gctcttcttaaattgtccaaggtactttgtttggatgagtgcacagccaatgttgacact
aaaacagcttcaatactacaaagtacaatattcagtgaatgcagggccatgacggtgatc
acgattgctcatcgcatttccacagttttgaatatggacaacatccttgttcttgaccga
ggaaacctggttgagcaaggtaacccaaaagctcttctacaagacgaatcctccatattt
tcaagttttgctaaagcttcaacaatgtag

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