Populus trichocarpa (black cottonwood): 7493233
Help
Entry
7493233 CDS
T01077
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7493233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7493233
Ion channels [BR:
pop04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
7493233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
7493233
NCBI-ProteinID:
XP_002304729
LinkDB
All DBs
Position
3:complement(18804820..18809837)
Genome browser
AA seq
739 aa
AA seq
DB search
MFDCNYKSQYIGGQKEKFVRLDDFDTLSVTSNKKGMKKLRFNLDGSNIAGHGKKNASKSL
RYGVKRGSEGMLTIGRSLRTGVTRAVFPEDLKVSEKMIFDPQDKSLLLWNRLLIISCILS
VSVDPLFFYLPVFNYRMACLGMDTNLAATITTMRTLLDVFYLIRMALQFRIAYVAPSSRV
FGRGELVIDPAQIATRYLSRYFIVDFLSVLPLPQIVVWKYLNNKKKGSEVLATKQALLII
VFLQYIPRFARFLPLGSDLKKTAGSFAESAFAGAAYYLLWYMLASHIAGAFWYLLAIERK
DTCWREACILSGKCNIDFLYCGNKALPGFHGWRRISDEVLGNKCSVSEDDNPRFNYGIYF
QAMSSDIVSSRNFVSKFFYCLWWGLQNLSTLGQGLLTSTYPLEVIFSILLAIAGLILFAL
LIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEE
TLVQSLPKDLKRDIKRHLCLNLVRRVPLFANMDETLLDAICERLKPSLYTEETYIVREGD
PVDEMLFIIRGRLESVTTDGGRSGFFNRGVLKEGDFCGEELLTWALDPKSLGNLPSSTRT
VRALTEVEAFALEAEELKFVASQFRRLHSRQLQHTFRFYSQQWRTWASCFIQAAWRRYSR
RRAAELRRLEEEEEEVDYDEEDDDERALVEENDGSARLGATILASRFAANALRGHRLRSL
NSRALMKLQRPPEPDFSEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattgtaactacaagtcacaatatattggtggccagaaggagaaatttgtaagg
ttggatgattttgatacattatcagtgacttctaataagaaaggaatgaagaaattgaga
tttaatttagatggttctaatatagctggccatggaaagaaaaatgcttcaaaatccctt
aggtatggggtgaaaagaggatcagaaggaatgttaacaattggacgatcacttagaaca
ggagttactcgtgcagtgtttccagaggaccttaaggtgtctgagaagatgatttttgat
cctcaagacaaatcacttctgttatggaataggcttttgatcatatcatgcattttatca
gtatctgttgatcctttgttcttttatcttcctgtcttcaactatcggatggcctgtctg
ggtatggatacaaatttagcagcaacaattacaactatgaggacactacttgatgttttc
tatctgattcgcatggctcttcagtttcgaatagcctatgttgcaccatcatcaagggtt
ttcggacgaggtgaacttgtgattgatcctgcacagatagccaccagatatttaagccgt
tattttattgttgattttctctctgtgctccctctgcctcagatagtggtatggaaatat
cttaataataaaaagaagggctcggaggtgttagctactaagcaggcattgctaattatt
gtttttcttcaatacatcccaaggtttgctcgctttttgcctttggggtcagacctgaaa
aagaccgccggctccttcgctgagagtgcttttgctggtgctgcgtactatctgctttgg
tacatgcttgccagtcatatagcaggtgctttctggtatttactagccattgaacgcaaa
gatacatgctggagagaagcttgcattctaagtgggaaatgtaacatagacttcttgtat
tgtggcaacaaagcactgccaggtttccacggttggcgaaggataagtgatgaggttctt
ggaaacaaatgttctgtcagcgaagatgataatccacgatttaattatggaatctatttc
caggctatgtcatcagacattgtgtcatccaggaactttgtctccaaattcttttactgt
ttatggtggggcctgcaaaatttgagtacacttggtcagggcctactaacaagcacctat
cctttggaagttatcttttctatactattagctattgctgggcttatcctcttcgcactt
ctgattggaaatatgcagacctaccttcagtctcttactgttcgtttagaggagatgagg
attaaaaggcgtgattctgagcagtggatgcatcatcgcttgcttccgcaggatcttaga
gagcgagttaggcgctatgatcagtacaaatggttggaaactcgtggagtggatgaagag
actttggtccaaagtctaccaaaagatcttaaaagggatatcaagaggcatctctgtctg
aatttggtcagaagagtccctctatttgccaacatggatgaaacattgttggatgccatc
tgcgagagactgaagccaagtttgtatacagaagagacttacatcgtccgtgaaggggat
ccagttgacgagatgcttttcatcattcgcggacgcctggagagtgtaactacagatggt
ggaaggagtggatttttcaacagaggtgtattgaaagaaggggacttttgtggtgaggag
cttctgacttgggcactggaccctaaatctcttggtaatttgccatcatcaactaggaca
gtgagggcattgactgaggtagaggcttttgccttagaagctgaagagctgaagtttgtt
gcatctcaatttaggcgtcttcatagcaggcagttgcaacacaccttccgtttctactct
cagcaatggaggacttgggcttcctgctttatccaagctgcttggcgccggtattccagg
aggagagcagcagaacttcgtcgcctagaagaagaggaggaggaggtagattacgacgag
gaagatgacgatgaaagggcattagttgaggaaaatgatggctctgctagactaggtgca
acaatccttgcttcacgctttgctgccaatgctcttcgtggacacaggcttcgcagcttg
aattccagagccttgatgaagctgcagaggcctccagaacctgacttcagtgaggagtaa
DBGET
integrated database retrieval system
