Populus trichocarpa (black cottonwood): 7493237
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Entry
7493237 CDS
T01077
Name
(RefSeq) heat shock 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
pop04141
Protein processing in endoplasmic reticulum
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7493237
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7493237
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7493237
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7493237
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7493237
03009 Ribosome biogenesis [BR:
pop03009
]
7493237
03110 Chaperones and folding catalysts [BR:
pop03110
]
7493237
04131 Membrane trafficking [BR:
pop04131
]
7493237
03051 Proteasome [BR:
pop03051
]
7493237
03029 Mitochondrial biogenesis [BR:
pop03029
]
7493237
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7493237
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
7493237
Spliceosome [BR:
pop03041
]
Complex B
Other components
Prp19 complex
7493237
Complex C
Prp19-CDC5 complex
7493237
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
7493237
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP70 / DNAK
7493237
Membrane trafficking [BR:
pop04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
7493237
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
7493237
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
7493237
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
7493237
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
7493237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Radial_spoke_3
ParM_N
NA-iREase1
Raco_middle
Motif
Other DBs
NCBI-GeneID:
7493237
NCBI-ProteinID:
XP_002303859
LinkDB
All DBs
Position
3:18887661..18890140
Genome browser
AA seq
651 aa
AA seq
DB search
MERKAIGIDLGTSYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
NPQNTVFDAKRLIGRGFSAPSVQRDMKLWPFKVIPGPGCKPMIVVKHKGEEKQFSAEEIS
SMVLMKMKEIAEAYLGHSVKNAVVTVPAYFNDLQRQATKDAGAISGLNVLRIINEPTAAA
IAYGLDRKESRRGEQNVLIFDLGGGTLDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLV
NHFFAEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTTQTTIEIDSLFEGIDFYTKIT
RARFEELNTDLFRKCTERVEKCLRDSKIEKSHVHEVVLVGGSTRVLRVQQLLQDFFNGKE
LCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLHVLDVTPLSLWIKTAGDVKTVLIPRNT
KIPTKKELIVSTCSDNQPRVLIQVYKRESARTKYNDLLGKLELTGIPPAPRGVPQINVCF
DIDANGILNVSAEDRTAGVKNKITITNYKGRLSKDEIERMVQETEKYKAEDGEVKKKVDA
KNSLENYVYNMRNTVKDEKFAGKLDRAGKQKIEKAIDETIQWLERNQLAEVDEFADKQRE
LEGLCNPIIAKMYQGAASDVSMGGGAEMPNGGYGKPSSGGSGAGPKIEEVD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaggccattggaattgatcttggcacgagctacagttgtgtaggcgtgtgg
cagaatgatcgtgtagagatcatagccaatgaccaagggaatagaacgactccatcttat
gttgccttcactgatactgaacgtttgataggtgatgcagccaagaaccaagttgccatg
aatcctcaaaacactgtttttgacgcgaaaagacttattggcaggggtttctccgcccct
tctgttcagcgtgacatgaagctgtggccttttaaggtgattccaggtcctggttgtaag
cctatgattgttgttaagcataaaggtgaagagaagcagttttccgctgaggagatatct
tctatggttttgatgaaaatgaaggagattgctgaggcttatctgggtcattctgtaaag
aatgctgtggtgactgtgcctgcttattttaatgacttgcaaaggcaggctacgaaggat
gctggtgctatttctgggctcaatgttttgaggattatcaatgagcctactgcagctgct
attgcttatggtttggatagaaaggagtctcgaagaggcgagcagaatgtgcttattttc
gatcttggtggtggaactcttgatgtttctctgttgacgatcgaggaggggatttttgaa
gtgaaggctactgctggtgatactcatcttggaggtgaggacttcgataacaggcttgtt
aatcatttttttgcggagttcaagaggaagcacaagaaggatattagtggtaatccaaga
gctttgagaaggttgaggacttcctgtgagagggcgaagaggactttgtcttcgactaca
cagacgacgattgagattgattctctgtttgaaggtattgatttctacactaaaattaca
agagcgaggtttgaagaattgaacacggatttgtttaggaagtgcacggaacgtgtggag
aaatgtcttcgtgattcaaagatcgaaaagagtcatgttcatgaggttgttcttgttggt
gggtcaacaagagttctcagagtgcagcaactcttgcaagacttcttcaatggcaaggaa
ctttgcaagagcatcaatcctgatgaagctgttgcttatggtgctgctgtccaagctgca
attttgagtggtgaagggaatgagaaggttcaagatttgcatgttcttgatgttactcct
ctaagcctttggattaagactgctggtgatgtaaagacagttttgattccaagaaacaca
aagattcccaccaagaaggagctaatcgtctctacatgctctgataatcagccaagagtg
cttattcaggtttataaacgtgaaagtgctagaaccaaatacaatgatcttcttggtaaa
ctcgagctcacaggcattcctccagccccaagaggagtccctcagatcaatgtatgtttc
gatattgatgctaatggaattctgaatgtttctgcggaggataggactgcaggagtgaag
aacaagatcaccatcaccaattacaagggaagattgagcaaagatgagattgagagaatg
gtgcaggaaacagagaagtacaaggcagaggatggggaggttaagaagaaggtggacgcc
aagaactcattggagaattatgtttacaatatgagaaatacagtgaaggatgagaagttt
gcagggaaattggatagagctggcaagcagaagattgagaaagcaattgatgagactatt
cagtggttggaaaggaaccaattggcagaggtggatgaatttgcagacaaacagagggag
ttagagggcttgtgcaatccaattattgcaaagatgtatcaaggcgctgcttcagacgtg
tcaatgggtggtggtgctgaaatgccaaatggtggttatggcaagcctagctccggaggt
tctggtgctggaccgaagattgaggaagttgattga
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