Populus trichocarpa (black cottonwood): 7493378 Help Entry 7493378           CDS       T01077                                  Name (RefSeq) autophagy-related protein 11   KO K08330   autophagy-related protein 11 Organism pop  Populus trichocarpa (black cottonwood) Pathway pop04136   Autophagy - other Brite KEGG Orthology (KO) [BR:pop00001]  09140 Cellular Processes   09141 Transport and catabolism    04136 Autophagy - other     7493378  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pop04131]     7493378    03029 Mitochondrial biogenesis [BR:pop03029]     7493378 Membrane trafficking [BR:pop04131]  Autophagy   Cytoplasm to vacuolar targeting (CVT) pathway    Scaffold protein     7493378   Mitophagy    Scaffold proteins     7493378 Mitochondrial biogenesis [BR:pop03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     7493378 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ATG17_like ATG11 ubiquitin Motif Other DBs NCBI-GeneID:  7493378 NCBI-ProteinID:  XP_002325118 UniProt:  A0ACC0RMI4 A0ACC0RNI1 B9IMA3 LinkDB All DBs Position 18:complement(12274848..12281955) Genome browser AA seq 1153 aa AA seqDB search MSSSITEGVVNQPKLLVHLAENGHSFLLDCDETTPVEAVMQRIESVSGINFNYQLVLCLE KKLEPQRSLSAYKLPSSDGEVFIYNRARMQTNPLPPALEQIDVLEIADPPPPASSHNPHP LDDASDPALKALPSYERQFRYHYHRGQAMYRRTQVKHEHCQRLLREHKVQERAMEVARIN VQQFYRAILQNYSEFMKRYTQQHRIHLDLLTNFERDLEKLRSIKLHPSLQSDSRKCLVDF VKEDNSRKAVENCSNSHRQFEKKVLEFKQNFSDAKRKVEELFSCGAASSIRNLDLTIKEH QRFINEQKSIMQSLSKDVSTVKNLVDDCLSCQLSSSIRPHDAVSALGPMYDVHDKNHLPR MLACEHSISKLLDFCNDKKNEMNVFVHDYLQKIAYVTYLMKDVKLQFPAFREAMLCQDNI FRDLKLFRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATRREVEVRRREEFLKTN NLYIPRDILTSMGLYDTPNQCDVNIAPFDTNLLDIDISDLDRYAPDYLVGLPSKGDKTAS LKGSFSTSNDCSHSTEMEEIGEEAVEKDGSEEPLEDCELLEIAGTSKMEVENAKLKAELA SAIALICSLCPEIEYESMDDSTVDSLLKNADKTNEALRLKDEYGKHLQSLLKAKHVQCMS YEKRIQELEQRLSDQYLQGQKLSNSKDASDFALLAAKTEDCKPEISSGGEAHMPYALTSE PMDEVSCISSLNAKLGLFTRQTSKGREGFDENMMDSSGMLNTQLDSSMAEPHREELQVCD KDGKDKMARQLGMSLTNSSTAESMPEPLDVAPSDADAEPKVSSDHDIVLDLQTALAENSN QLSETDAKLKSAVEEVAVLTRELEMSRKLLDESQMNCAHLENCLHEAREEAQTHLCAADR RASEYNKLRASAVKLRGLFERLRCCVYAPGGVAGFADSLRALAQSLANSSNDNEDEGAAE FQKCVRVLADKVGFLSTHLDKYPKLEAANEQLGKELETKKELVATLYKKHQLEKQANKER ISFSRLEVHEIAAFVLNSAGHYEAINRNSSNYYLSAESVALFTDHLPSRPSYIVGQIVHI ERQAVKPLHPASTRPEHGRADQLDLLTTDQGIDLLNFNLGSTSNPYNLPMGCEYFVVTVA MLPDTTIHSAPPS NT seq 3462 nt NT seq  +upstreamnt  +downstreamnt atgagttcaagcatcacagaaggtgtggtaaatcagcccaaacttttagttcatctagca gaaaatggtcattcatttctacttgattgcgatgaaacaacgcctgtggaagctgtcatg cagcgtattgaatcagtttctgggattaacttcaactaccagcttgttctgtgtttggag aagaaacttgaacctcagcggtcgctttctgcttataagcttccatctagtgatggagaa gtgtttatatacaacagagcaaggatgcaaaccaatccgctcccccctgcactcgaacaa attgatgtccttgaaattgcagatcctccaccgccagcttcttcacataacccccatcct ttagatgatgcttcagacccagctctgaaggctttgccatcttatgaaagacagtttagg taccattaccatagaggtcaagcaatgtataggagaacccaagtaaagcatgagcattgc cagaggttattgagggagcataaggttcaggagagggcaatggaggttgctaggattaat gtgcaacaattctatagagcaattcttcagaattactcagagttcatgaagcgttataca caacaacacaggatacatttagatcttttaacgaattttgagagagatttagagaaactg aggtcgatcaagcttcatccatctttgcagtctgattcacgcaaatgcttagtggatttt gtgaaggaagataactcgaggaaggccgtggagaattgtagcaattcacataggcagttt gagaagaaggtattggagttcaagcaaaactttagtgatgcaaagcgcaaggtggaagaa ttattttcttgcggagcagcatcttctattaggaatctggatcttaccatcaaggagcat cagcgattcatcaatgaacagaagagcataatgcagtctttgagcaaagatgtaagcacg gtaaagaaccttgtggatgattgtctgtcatgccaattgtcttcctcaattcgacctcac gatgcagtttcagccctgggccctatgtatgatgtccatgacaagaatcatttgcccagg atgctggcttgtgaacattcaatttccaagctgcttgatttttgcaatgataagaagaat gagatgaatgtctttgtgcatgattacctacaaaagatcgcttatgttacttacctcatg aaagatgtgaagttacagtttcctgcttttagagaggcaatgttgtgtcaggataatatt tttagggacttgaagctatttcgtgggatcggtcctgcatatagagcctgccttgctgaa gttgtgagaagaaaggcttccatgaaactttacatgggtatggctggacaactggctgag cggcttgctacaaggagggaggttgaggttaggagacgggaggagtttctgaagacaaac aatttatatataccaagagatatattaacatcaatggggctatatgatactcctaatcag tgtgatgtcaatatagctccatttgacactaatttgcttgatattgacatctcagacctg gaccgttatgctcctgattatttggttggacttccttcaaaaggtgataagactgcaagc ttgaaaggttcattttctacatctaatgactgctctcactcaactgagatggaagaaatt ggtgaggaagcagttgagaaagatggctctgaggagcccctcgaggactgtgagctgtta gagattgctggaactagcaagatggaagttgagaatgcaaaactgaaagctgaactagct tctgcaatagccctgatatgttccctttgcccagaaattgaatacgagtcaatggatgat agcacagtggatagtctattgaagaatgcagataagacaaatgaagccttgcggctgaaa gatgagtatggaaagcaccttcaatctttgcttaaggcaaagcatgtgcaatgtatgtcg tatgagaagcgcattcaagaactagagcagagattgtctgaccagtatttacaggggcag aaactttcaaatagtaaagatgcatcagactttgctcttttagctgcaaagactgaagac tgtaaaccagaaatttccagcggtggtgaagcacacatgccttatgcattgacctcagag cccatggatgaggtttcttgcatttctagtttgaatgcgaaactggggcttttcaccagg caaacaagcaaaggtagagaaggttttgatgaaaatatgatggactcctctgggatgttg aatactcagttggattcatcaatggcggagcctcatcgtgaagagctgcaagtttgtgat aaagatgggaaggacaagatggcgcgacaactgggcatgtcactgactaacagttccaca gctgagagcatgcctgagcctctcgatgttgcaccatctgatgcagacgctgagcctaaa gtcagtagtgaccatgacattgtgttagaccttcaaactgcacttgctgaaaattcaaac caattgagtgaaactgatgcaaagctcaaatctgctgtggaggaggttgctgtgctcaca agggagttagaaatgagtcggaagctccttgatgaatctcagatgaattgtgctcacttg gagaattgcttgcatgaagcaagagaggaagctcaaactcatctttgcgcggctgatcga agggcttcggaatacaataaactgcgggcatctgctgtgaaactccgtggcctttttgaa aggcttaggtgctgtgtatatgctccaggtggagttgctggttttgctgattctttgcgt gctttagctcaatctttggccaattcaagcaatgacaatgaggatgagggtgctgctgag ttccagaaatgcgtacgcgtccttgctgataaagttggtttcttgtccacacaccttgat aagtaccccaagctcgaagctgcaaatgaacaacttggaaaagaattggaaacgaagaag gagctggttgcaactttgtacaaaaagcatcaacttgagaagcaggcaaacaaagaaagg atatcttttagccggttggaagttcatgagatcgctgcatttgttctcaactcagctgga cattatgaggctatcaaccggaactcctctaactactacctgtctgctgaatctgtggcc ctgttcacagaccatctcccaagcagacccagctacattgttgggcagattgtgcatatt gaacgccaagctgtaaagccattgcatcctgcctcaactaggcctgagcatggtagggca gatcaactggatcttctgaccactgaccaagggattgacctgttgaacttcaatttggga tcgacttccaacccatacaatcttcctatggggtgtgaatactttgtagtgacagtagcc atgttacctgatacaaccattcattcagcgcctccttcctga

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