Populus trichocarpa (black cottonwood): 7493385
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Entry
7493385 CDS
T01077
Name
(RefSeq) eukaryotic translation initiation factor
KO
K03260
translation initiation factor 4G
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7493385
03012 Translation factors [BR:
pop03012
]
7493385
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
7493385
mRNA cycle factors
Stress granule specific factors
7493385
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
eIF-4
7493385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
7493385
NCBI-ProteinID:
XP_002324526
UniProt:
B9IMB5
LinkDB
All DBs
Position
18:12391938..12398532
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AA seq
793 aa
AA seq
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MQQGDQTVLSLRPGGGRGSRLFNPRLEQSSSSTSSSISFGDLPLLRPHGGATSFKTGDLR
FEGRERVRYTRDQLLQLREAVVIFDEILKIKQEIEAELFGEDQSWSRGETNPPTQSQIRY
SEPDNRDWRGRSAQFSPSGEERSRDSIRENRDFGGRYDSRQQEGNQSNRQDQLNSQFARA
QISSHQGGPAPALVKAEVPWSTRRVNLSEKERVLKTVKGILNKLTPEKFDVLKGQLIDSG
ITSTDILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPSFPSDEPGGKEITFKRVLLN
ICQEAFEGADKLREELRQMTAPEQELERRDKEKLVKLRTLGNMRLIGELLKQSMVPEKIV
HHIVQELLGPDNKGCPAEESVEAICQFFNTIGKQLDESPKSRRINDVYFGRLKELASNPQ
LAPRLKFMVRGVLDLRMNNWIPRREEVKAKTITEIHSEAEKTLGLRPGATASIRNNRGLI
STAPGTTGPGGFPINRPGTGGMMPGMPGTRRMPGMPGIDNDNREIPRNRPMPRGDGPMQL
GGRVQSPMFNKSSLNTRLLPEGSGGFIGGRSSALLHGSGGPPSRPSNSGFGAEPPAQASL
PSKTLPAPSVPPVSERPVVSAARVNPDELKRKTVSLLKEYFSVLLLDEALQCVEELKSPG
YHPEVVKEAIFIALEANPPCVEPVAKLLEYLFSKKVLTAKDIGTGCLLYGSMLDDIGIDL
PKAPNNFGEIIGKLVLVGGLDFKMVIEVLKKMEDDMYRRAMFDAAIRVIISSPDGQLVLD
TQASAIEACRSLF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaggtgatcagacggtgttaagcttaagacctggtggtggtcgagggagtaga
ctcttcaatcctcgcttggagcagtcctcttcttctacatcttcttctatttctttcggt
gatctccctctcttgcgtcctcatggcggtgctacttcttttaagactggagacttgcgg
tttgagggtcgtgagcgtgttcggtacactagagaccaactgttgcagcttagagaggct
gttgtaatctttgatgagattctaaaaatcaaacaagaaattgaagctgagctttttggt
gaagatcagagctggagtcgtggagaaaccaatcctccaactcaatctcagattcgttat
tctgagccagacaatcgtgattggcgtggtcgttctgctcaattttctccatctggagag
gagaggtcccgggattctattcgagaaaatagagactttggtgggagatatgactccaga
cagcaagaaggcaatcagtctaatcgtcaagaccagctcaactcccaattcgcgagagca
caaatctcttcccatcagggaggacctgctcctgctttggtcaaggctgaggtaccatgg
tctactagaagggtgaatctttctgaaaaggaacgtgtcttgaagactgtaaaaggtata
ctgaacaagctcacccctgagaagtttgatgttctcaagggtcaacttattgactctgga
attacatcaactgatatcttgaagggtgtgatatcacttatattcgacaaggctgttctt
gaacccacattctgccctatgtacgcacaactgtgctctgatcttaatgaaaagctcccc
tcattcccatcagatgaacctggtgggaaagagatcacatttaagcgggtgctcttgaat
atctgtcaagaggcatttgaaggtgctgataagctgagggaggaattaaggcagatgaca
gctccagagcaagagcttgagcgtagggataaggaaaaactggtcaagcttcgcactctt
ggaaacatgcgtttgattggagagcttctgaagcagagcatggttcctgaaaagattgtc
catcatattgttcaggagcttctagggcccgataataaaggttgtcctgcagaagaaagt
gttgaggccatatgccagttctttaataccattggtaagcagcttgatgaaagcccaaag
tcgcgacgaataaatgatgtgtactttggtcgattgaaggaactggcatcaaatcctcag
ctggctccccgactgaagttcatggtgcgcggtgttcttgacctacggatgaacaactgg
attcctaggcgtgaagaggtcaaagctaaaaccatcacagagatacattctgaggcagaa
aagactcttgggctgcgtccaggtgctactgcaagcattagaaataaccgtggtcttata
tccaccgctccagggactactggccctgggggcttccccatcaaccgacctggaactggg
gggatgatgcctggcatgccaggaactaggagaatgcctgggatgcctggaattgataat
gacaaccgggagatacctagaaaccgcccaatgccaaggggtgatggtcctatgcagctt
gggggacgtgtccaatcaccaatgtttaacaagtcatcactaaacaccaggctgttaccc
gagggcagtggtggttttataggtggtaggagtagtgccctcctgcatggaagtggcggt
cctccttctaggccatcaaactctggttttggtgcagagcctcctgctcaagcctctctg
cctagtaaaacccttcctgctccttccgtgcctccagtttcagagagaccagttgtttca
gctgctagggtgaatcctgatgaactcaagagaaagactgtctcactcctgaaggaatat
ttcagtgtcttgcttctggatgaggcattgcaatgtgtggaggagctgaagtctccaggt
tatcaccctgaagttgtcaaggaagctatcttcattgcactagaggcaaacccaccatgt
gttgaaccagttgccaaacttttggaatatttgttttccaagaaggtcctcacagctaaa
gacatagggaccgggtgcttactctatggttctatgttggatgatattggcattgatttg
ccaaaggcaccaaataattttggtgaaattatcgggaaattagttttggttgggggattg
gactttaaaatggtaatagaggtccttaagaagatggaggatgatatgtatcggagagcc
atgtttgatgcagcaataagggtcattatttcaagtccggatgggcaacttgtattagac
actcaagcatccgccattgaggcttgccggagtttgttttag
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