KEGG   Populus trichocarpa (black cottonwood): 7493488
Entry
7493488           CDS       T01077                                 
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
  KO
K14026  SEL1 protein
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    7493488
SSDB
Motif
Pfam: Sel1 TPR_2 TPR_CcmH_CycH TPR_6
Other DBs
NCBI-GeneID: 7493488
NCBI-ProteinID: XP_002317869
LinkDB
Position
12:4231648..4236628
AA seq 682 aa
MQRHKLTLSLLIFSLLPLSLHARQYFLILSQEDLKDIPSSPTTTSSDVDPNESPPEWDEF
GDSDSKPEHELDPGSWRPIFEPDATTSSTSASKLDPEMEQYYSAVEKMFSAVSDSEVKVV
EEAVAEIEELATVKGNSHAQSVLGFLYGLGQIKERDKAKAFLYHHFAADGGSLQSKSALA
YTYYRQQMYENAVKLYAELAEVAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSRGEDD
DVFQILEYQAQKGNAGAMFKIGYFHYFGLRGLRRDHAKALAWFSKAVEKGEPRSMELLGE
IYARGAGVERNYTKALEWLTLAAQQQLYSAYNGMGYLYVKGYGVQKKNYSKAKEYFERAA
DHEDAGGHYNLGVMHLKGIGVKRDVRLACQYFIVAANAGQPKAFYQLAKMFHMGVGLKKN
LLMATALYKLVAERGPWNSLSRWALESYLKGDVGKAFLLYSRMAELGYEIAQSNAAWILD
KYAEGSMCMGESGFCTDSERHQRAHFLWWQASEQGNEHAALLIGDAYYYGRGTERDYERA
AEAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDPAAKLPVTLALAS
LWIRKNYADSFMVHVIDSLPGVYPKIKAWVENIILEEGNAAILTLFVCLLTVLYFRERQR
RNAAVEVGIQGQHIHHAPAALN
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgcagagacacaaactcacactctctcttctaattttctctctcctcccactctctctc
cacgcccgccagtactttctcatcctctctcaagaagacctcaaagacatcccttcctcc
ccaaccactacctcctccgatgtggaccccaatgagtctccacccgagtgggacgagttc
ggcgactctgactccaaacccgaacacgaactcgaccctggctcctggcgcccgatcttc
gaacccgacgccaccacatcctccacctctgcatcgaaactcgatccggagatggagcag
tactactccgccgtggagaagatgttttcggctgtgagtgacagtgaggttaaggttgtg
gaggaagcagtggcggaaattgaggaattggcgacggtgaaggggaattcccatgcccaa
tcggttttagggtttttgtatggattagggcaaattaaagagagggataaagctaaggct
tttttgtatcatcactttgcagccgatggaggcagtttgcagtctaaatcagctcttgcc
tacacgtattaccggcagcagatgtatgaaaatgcggttaaattatatgcggaattagca
gaagtagcagtaaatagttttttgatttcgaaggattccccggtgattgaaccggttagg
atacataatggggccgaggagaataaagaggctttgaggaaatcacgaggggaggatgac
gatgtgttccagattttggaatatcaagctcaaaaggggaatgcgggagcaatgtttaaa
attgggtattttcactactttggattgagaggattgaggcgtgatcatgccaaagctttg
gcatggttttcaaaggctgtagagaaaggggaacccaggtcaatggaacttcttggtgaa
atatatgcccggggagctggagttgagaggaactatactaaagcgcttgaatggcttaca
cttgctgcacaacagcagctttattcggcttataatggcatggggtatttgtatgtcaag
ggttatggagtgcaaaagaagaactacagtaaagcaaaagaatactttgagagggctgct
gaccatgaagatgctggtgggcactataaccttggagtaatgcatcttaaagggattgga
gtaaagagagatgtacgtttggcatgccagtattttatagtagctgctaacgcaggtcaa
ccaaaggcattttaccagctggcaaagatgtttcatatgggggtggggcttaaaaagaat
cttcttatggctactgcattatacaaactagtagcagaacggggcccgtggaactccttg
tctagatgggcattggagtcatacctaaaaggtgatgtgggcaaagcattcctgttgtat
tcaaggatggctgagctgggctatgaaattgcacaaagtaatgctgcatggattcttgac
aaatatgcagagggtagcatgtgtatgggggaatctgggttttgtacagactcggaaaga
caccagcgtgcccattttttgtggtggcaagcttcagaacagggcaatgaacatgctgct
ttgcttattggcgatgcgtattactatggtaggggtactgagagggattatgaacgagcg
gcagaggcttacatgcatgccaaatcgcaatctaatgcgcaagctatgttcaatcttggt
tacatgcatgaacatggtcaaggacttccactcgaccttcatcttgctaagcgttactat
gaccaagctcttgagatcgatcctgcagcaaagttacctgtcacactagccctcgcaagc
ttgtggataagaaagaactatgcagacagtttcatggtacatgtaattgattcattgcct
ggagtctatccaaaaatcaaagcatgggtggagaatattatcctggaagaaggaaacgca
gcaatacttactctttttgtctgtctgcttacggttctctattttcgtgaacggcaacga
aggaatgctgctgttgaggttggcatacaaggccaacatatccatcatgcacctgctgcg
ctcaattag

DBGET integrated database retrieval system