Populus trichocarpa (black cottonwood): 7493506
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Entry
7493506 CDS
T01077
Name
(RefSeq) protein DETOXIFICATION 16 isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7493506
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
7493506
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
7493506
NCBI-ProteinID:
XP_024437557
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Position
12:complement(4802114..4807000)
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AA seq
492 aa
AA seq
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MEREQQSLSLNTPLCEGNGVGLYEERNQERGISKKEILEEVKRQLWLAGPLISVSLLQYC
IQMISVMFVGHLGELSLSGASMATSFASVTGFSLLLGMASALDTFCGQAYGARQFHMLSI
HMQRAMVVLLLVSIPLAIIWANTRPILIACGQQKDIAEEAGLYARFMIPSLFAYGLLQCL
VKFLQTQNIVFPMMLCAGITTLLHILVCWVLVFKSGLGYIGAALASSFSYWINVLLLVLY
VKFSSSCSKTWTGFSKEAFHDIVNFMRLAIPSAVMVCLEMWSFESMVLMSGLLPNPELET
SVLSISLNTAATVWMIPYGLSGAASTRVSNELGAQHPYRARLAVCVVITIAVAEGILVGI
VLILIRNVWGYAYSNDIEVVDYVAVMLPVVATSNFLDGLQCVLSGVARGCGWQKIGAYIN
LGSYYLVGIPIAILLAFVFHVGGKGLWLGIICALIVQVFSLATITIRTNWEQEAKKATER
VYDEVIPVDTVS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagagagagcagcaaagtttgtctcttaatacacctttatgtgaaggaaacggtgtc
ggactttacgaagaaagaaaccaagaaaggggtatcagcaagaaggagattcttgaagaa
gtgaaaaggcagctatggctagcaggtcctttaatatctgtgagtctgttgcaatattgt
atacaaatgatttctgtgatgtttgtaggtcatcttggtgagttaagcttgtctggtgct
tcaatggccacttcctttgcgagtgtcactggtttcagcttgttgttgggaatggcaagt
gcgcttgatacattttgcgggcaggcatatggagcaaggcagtttcatatgctcagcata
cacatgcagagagccatggttgttcttttacttgttagcataccccttgccatcatctgg
gcaaacacaagacctatcctaattgcctgtggccaacaaaaagatatagcagaggaagct
ggactgtatgctcgtttcatgatcccaagcctttttgcatatggtcttcttcaatgcctg
gtcaaattcttacagactcagaacatagtatttccgatgatgctatgcgcaggaatcacg
actttacttcacatccttgtgtgttgggttctggttttcaaatctggccttggatatata
ggagctgcattggctagttcattctcttattggatcaatgtattacttttggtactttat
gtcaagttctcttcttcatgttcaaaaacttggacaggcttttcaaaggaggccttccac
gatattgttaattttatgaggcttgcaattccttcagctgttatggtttgcttggaaatg
tggtcttttgaatcgatggttcttatgtctggtctgctccctaatccagaattggagact
tcagttctttctattagccttaatacagctgcaactgtttggatgatcccttacggacta
agtggtgctgccagcacccgagtctcaaatgagttaggagcacagcatccataccgcgcg
cgattagcagtttgcgttgtcatcacaattgctgttgctgaaggcattttggtgggaata
gtcttgatattgattcgcaatgtttggggctacgcctatagcaatgacatagaagttgtt
gactatgtagcagtcatgttgcctgttgtagcgacatccaacttcttagatggactccaa
tgtgttctttcaggcgttgccagaggatgtggttggcagaagattggtgcatacatcaat
cttggatcatattatttggtgggaatccccattgcaattttattagcttttgtctttcat
gttggaggaaagggcctttggctggggataatatgtgcactcatcgtgcaagttttttct
cttgccactattactattcgtacaaattgggagcaagaagcaaagaaggctactgaaaga
gtatatgatgaagtaattccagtggatacagtatcatga
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