Populus trichocarpa (black cottonwood): 7493516
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Entry
7493516 CDS
T01077
Name
(RefSeq) AP-3 complex subunit delta
KO
K12396
AP-3 complex subunit delta
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
7493516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7493516
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
AP-3 complex
7493516
Endosome - Golgi transport
7493516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
INTS1_R4
INTS7_N
Motif
Other DBs
NCBI-GeneID:
7493516
NCBI-ProteinID:
XP_024438451
LinkDB
All DBs
Position
12:complement(5239982..5243341)
Genome browser
AA seq
968 aa
AA seq
DB search
MASPSLMDTLFQRSLDDIIKGLRHQQSTESTFISKVIEEIRREIKTTDLQTKSTALQKLT
YLNSIHSIDMSWASFHAIECISSPTFAHKKIGYLAISQSFNESTPVILLITNQLRKDLNS
GNEFEVSLALDCLSRIGTVDLCRDLTSEVFTLMSTSKVFVRKKAVSVVLRLFEKYPDAVR
VCFKRLVESLESSDSQIVSAVVGVFCELASKEPRSYLPLAPEFYRILVDSRNNWVLIKVL
KIFANLAPLEPRLAKRVVEPICDHMRKTGAKSMVFECIRTVVTSFTEYESAVKLAAVKIR
EFLLEDDPNLKYLGLHVLSIMAPKNLWAVLENKDVVIQSLSDEDPNIKLKSLCLVMAMVS
ESNVVEICRVLVNYALKSDPEFCNEILGSILSTCCQNVYEIIIDFDWYVSLLGEMSRIPH
CQKGEEIENQLIDIGMRVKDVRPELVRVGRHLLIDPALLGNPFLHRILSAAAWVCGEYVE
FSRNPVELMEALLQPRTGLLPSSIRTVYMQSAFKVLIFCVCSYLVQKEDMTSEVSDLASK
RECSESSDLASAKAPVERDQDEGFNPRNSNQSYEDPSVVNGGHGQLSTSALMEEKSFTHE
SIFKLLNLMELAMCPLLGSYDVEIEERARNALGFIELVKRDILNPSLREANLETEEVSAS
RIVEWVHDAFSEELGPVSITAQERVLIPDELVLKENLADLEAICGNVELPSSCSFSLRSP
YYGESAGISFSNLQDEEDPEPSTEATSLLTEHRKLHELYYLPSEKNETITIANDYPPANY
PSSGINTNDDTQDLVTLTNQSLVSKRKPNHAKPRPVVVKLDEGDAAPVTAKKPEVKDDLL
SGAIRDILLLGNEAKPASSQSNPSDKSSIKKKGKEKLNVDLSDSKEDLAVREQPNPENPS
SRRSKHRGHGKEKSKKSQGKKDGDGSEDGGEKEKQKSRNRNGKHKTRQRADAPLNVVAQT
PPIPDFLL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccttctctaatggacacccttttccagcgcagtttagatgacataatcaaa
ggtcttcgccaccaacaaagtaccgaatccactttcatatccaaagttattgaagaaatc
cgtagagaaatcaaaaccactgacttgcaaaccaaatccactgcccttcaaaaactcact
tacctcaattcaatccactccattgacatgtcatgggcatcttttcacgccattgaatgc
atctcatctcccactttcgctcacaaaaagattggttatcttgcgatctctcagtccttc
aacgaatccacacctgttattttgctgatcactaatcaattaaggaaggatctcaatagt
ggcaatgagtttgaggtgagtttggctcttgattgcttatctagaattggcactgttgat
ttatgtagagatcttacttctgaagttttcactttgatgtccacttctaaggtttttgtt
agaaagaaagctgtaagtgttgttttaaggctttttgaaaaatacccagatgcagttagg
gtgtgttttaagagacttgttgagagtttagagagtagtgattcgcaaattgtgtctgca
gttgttggggtgttttgtgagcttgcttccaaagaacccagatcgtatcttccattggca
cctgagttttataggattttggttgattcgaggaataattgggtgttgattaaggtctta
aagatttttgcaaacttggctcctttagagcctcggttggctaaaagggtggttgagccg
atttgtgatcatatgagaaagactggggcgaagtcgatggtgtttgagtgtattaggact
gtagtcactagcttcactgagtatgaatctgcagtgaagcttgcagctgtcaaaattcgt
gagtttttattggaggatgatccgaatcttaagtatcttggactgcatgtgctatcaatt
atggcgccaaagaatttgtgggcagttttggagaataaggatgttgtgattcagtctttg
agtgatgaagatccgaatattaaactcaagtctttgtgtctggttatggcaatggtttca
gagagcaatgtggtggaaatttgcagggttttggttaattatgcgctcaaatctgaccct
gagttctgcaatgagattcttggttcaattttatcaacttgttgccagaatgtgtacgag
attataattgactttgattggtatgtgtcgcttcttggggaaatgtcaaggattccacat
tgccagaagggggaagaaattgagaatcagctaattgatattggtatgagagtcaaggat
gttaggccagagcttgttcgtgttggccgtcacttactgattgatccagcattacttggg
aatccttttctgcacaggatattatctgctgctgcttgggtgtgtggggaatatgtagaa
ttctcaaggaacccagttgaacttatggaggcattactacagcctcgtactggtctcctg
ccttcatcaatcagaacagtttacatgcagtctgcttttaaagtcctaatcttttgtgta
tgttcttaccttgtgcaaaaggaagatatgacatcagaagtttcagatttggcttctaaa
agggaatgctcagaaagttctgatttagcatcagctaaagctccagttgaacgtgaccaa
gatgaaggattcaatccaaggaattcaaaccaatcttatgaagatccttctgttgttaat
ggtgggcatggacagttgtctacatctgcattaatggaggaaaagagtttcacgcatgaa
tctatttttaaactgttaaacttgatggaattggctatgtgtccattattaggcagctat
gatgttgaaatagaggagagagcacggaatgcacttggatttattgagttggtaaaacgg
gatatattgaatccttcgctgcgcgaggcaaatttggagaccgaagaagtgagtgcttcc
agaattgttgaatgggtacatgatgccttctctgaggagcttggtccagtctcaataact
gcccaggagagagtactaataccagatgagctagtgcttaaggagaatcttgctgacttg
gaagcaatatgtggaaatgtagaattgccttcatcttgttcattttctcttagaagtcca
tattatggagaaagtgctggcatttcattctctaacctccaagatgaagaagatccagaa
ccatcaaccgaggccacttccttgcttacagaacaccggaagctgcatgagttgtattac
ctcccttcagagaagaacgaaactataactatagcaaatgattacccacctgccaattat
ccaagttctggcattaatacaaatgatgacacccaagatttagttacgcttacaaaccaa
tcactagtctcaaagagaaagccaaaccatgcaaagcctaggcctgtggtggtgaagttg
gatgaaggagatgcagcacctgtcactgccaagaaaccagaggtgaaagatgatttactt
tctggtgccattcgtgatatactcttattaggtaatgaagctaaacctgcgtcatctcaa
agtaatccatctgataagtcatctattaagaaaaaagggaaggagaaactaaacgttgat
ctatctgattcaaaagaagatctagctgttagagaacagcccaatcctgaaaatccaagt
tcaaggagaagtaaacacaggggtcatggtaaagagaaaagcaaaaaaagtcaagggaag
aaggatggggatggaagcgaagatggtggggagaaagaaaaacagaagagtagaaatcgt
aatggtaaacacaaaactcgtcaaagagctgatgcaccattaaacgtggttgctcaaaca
ccacctattcctgattttctcttataa
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