Populus trichocarpa (black cottonwood): 7493896
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Entry
7493896 CDS
T01077
Name
(RefSeq) DNA polymerase delta subunit 4
KO
K03505
DNA polymerase delta subunit 4
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03030
DNA replication
pop03410
Base excision repair
pop03420
Nucleotide excision repair
pop03430
Mismatch repair
pop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
7493896
03410 Base excision repair
7493896
03420 Nucleotide excision repair
7493896
03430 Mismatch repair
7493896
03440 Homologous recombination
7493896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
7493896
03400 DNA repair and recombination proteins [BR:
pop03400
]
7493896
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
7493896
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
7493896
MMR (mismatch excision repair)
DNA polymerase delta complex
7493896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
Motif
Other DBs
NCBI-GeneID:
7493896
NCBI-ProteinID:
XP_002319772
UniProt:
A9PI30
A9PA85
LinkDB
All DBs
Position
13:complement(6431047..6431971)
Genome browser
AA seq
122 aa
AA seq
DB search
MATASSNMKGFYRQKKNKNSGITKPTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDY
YDEHEGLLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDG
RV
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcatcaagcaacatgaagggtttctacaggcaaaagaagaacaagaatagt
ggtatcacaaaaccaacatcgtccaagaaatcatcccttcatcacattgcctctcttggc
tccgatattacacaaccaactgcccaggtttcccatggctctcctgatcataaagattat
tatgacgaacatgagggactgttgagacaatttgacatgaacatggcatatgggccgtgt
cttgggatgtctcggcttgcacgttgggagcgtgctcaacgtttaggtctaaacccaccg
aatgaatttgagggactgttgaaggctgaaatggttcaatcagaatgctggtgggatggt
cgcgtttag
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