Populus trichocarpa (black cottonwood): 7493911
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Entry
7493911 CDS
T01077
Name
(RefSeq) THO complex subunit 7A isoform X1
KO
K13176
THO complex subunit 7
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7493911
09122 Translation
03013 Nucleocytoplasmic transport
7493911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7493911
03041 Spliceosome [BR:
pop03041
]
7493911
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
7493911
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
7493911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Motif
Other DBs
NCBI-GeneID:
7493911
NCBI-ProteinID:
XP_002319257
LinkDB
All DBs
Position
13:6919992..6947506
Genome browser
AA seq
240 aa
AA seq
DB search
MLKGRKISGRGETVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFASYVSEI
EKDEDNYNDCVKLSKAFLQELSTFEIPLLKSKAVIDSNVREKENFNELKDDINRQILQAQ
ADIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENTAS
SRLLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDTGGVSEAMAVD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaggaagaaagatttctggaagaggggaaacagtagcggcgaactacgcattc
ggaccgctcgaagatgatgtaattataaaacataggctactcacccgcaccaccactaca
aggggtgaacccccgctgaagaaacttcagaagaagtttgcttcgtatgtttccgagatc
gagaaggatgaggataattacaatgactgtgtcaaactttctaaagcttttttacaggaa
ttgtctactttcgagattccattactcaagagcaaagctgttattgattctaatgtaaga
gagaaggagaattttaatgagttgaaggatgacataaataggcagattttgcaggcacag
gctgatattgaagatttaaagaagcagcttgaggagagcaaaattgaaaggcagcataag
gaggaatgtgaggcgataaggaaattgatcgccacgcagcctccaaggtcacttatgcag
aaggtgataacggatttggagaaagaaattgctgctttggaggcagaaaatacagccagt
tctaggttactggaacttcgaaagaaacaattcgttctcttgttgcatgtggtggatgag
ttacagaacactatagaggaagatgagaagaatttgattgaggagatgagagtggcaaca
gaagagcagaagaacggaatggaggatactggtggggtctcggaagccatggctgttgat
tag
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integrated database retrieval system
