Populus trichocarpa (black cottonwood): 7493960
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Entry
7493960 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7493960
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7493960
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
7493960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
7493960
NCBI-ProteinID:
XP_002307715
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All DBs
Position
5:complement(23590674..23595060)
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AA seq
434 aa
AA seq
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MSQNNIQSDSVQNPRVTWEGCSVLLDINDGDRLVFARLTAGSTLKIGNKKYSLRPLIGCP
FGSSFQIENGTEGPYLSRFIPSTEEREGCQIVDECKDNRAIVDNNEAQTLTSEDIDEMRR
QGAKGDEIIEALIANSATFEKKTAFSQEKYRIKKQKKYAPRVLLRRPSARSICEAYFKKY
PNRIGFLRVDALSLLLSLANVSANSDILLVDMVGGLLTGAVAERLGGTGCVCNTYLGSTP
SPVEIVRTFNFNNEICKRIVRAPLHDLCSDQTGTKKIDSCNAELNVQISTISIEEMPLPS
KHEAADSQTIVSPQSKMGKAPKAGEKASEEALKSWKENGFSSLIIAAPDADAWNLVKVLL
PLISYSAPFAIYHQYLQPLATCMHNLQQSKMAIGMQISEPWLREYQVLPSRTRPSMQMSS
FGGYILSGTKICSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaataacattcaatcagattcagttcaaaaccctagagtaacgtgggaaggt
tgcagtgtcttgctcgacattaacgatggcgaccgtttggtgtttgcccgattaacagct
ggctcgaccttgaaaattggaaataagaagtactctttacggcccttgattggatgccca
tttggctcttcttttcaaatcgagaatggaactgaagggccctatttatctaggtttatt
ccctccacggaagaaagagaaggatgtcaaatagtggacgaatgtaaggataatcgagct
attgttgataataatgaagcccaaacccttactagtgaagacatagacgaaatgcggagg
cagggtgcgaaaggtgacgagattattgaagctctcattgccaacagtgcaacatttgag
aagaaaacagcattttctcaagagaaatataggattaagaagcaaaaaaaatatgcccct
agagtgcttttgaggcgaccttctgctagaagcatatgcgaggcttacttcaagaaatac
ccaaatagaatcggattcctgcgagtagatgcgttatccttgttgctttcacttgctaat
gtttctgcgaactctgatatcctgttagtggatatggttggtggccttcttactggtgct
gtggcggagcgtttaggaggtacaggttgtgtttgcaatacttatcttggaagcacacca
tctcctgtggaaatagttagaacattcaacttcaataatgaaatttgcaaaagaattgtg
cgggctcctctgcatgacctttgttcagaccaaactggaacaaagaaaattgattcctgt
aatgcagaattaaatgtccaaatttcaactatcagcatagaagaaatgccacttccatcc
aagcatgaggctgcagattcacagactattgtctctccacaaagcaaaatgggcaaagcc
cctaaagctggagaaaaggcttcagaagaggcacttaagtcgtggaaggaaaatgggttc
tctagtctaataattgctgctccagatgcagatgcttggaacttagttaaggttctcctg
ccacttatatcgtattcggcaccgtttgctatctaccaccagtatcttcagcctcttgca
acatgcatgcacaatttacagcaaagtaaaatggcaattggtatgcaaatttcagaacct
tggctacgtgaatatcaggttcttccatcaagaactcgtccgtcaatgcagatgagttcc
tttgggggttacattcttagcgggaccaagatatgtagcagctaa
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