Populus trichocarpa (black cottonwood): 7493971
Help
Entry
7493971 CDS
T01077
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00196
Photosynthesis - antenna proteins
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
7493971
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pop00194
]
7493971
Photosynthesis proteins [BR:
pop00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
7493971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
7493971
NCBI-ProteinID:
XP_002306927
UniProt:
A9PHD4
LinkDB
All DBs
Position
5:23653563..23654605
Genome browser
AA seq
264 aa
AA seq
DB search
MAAATMALSSPSLAGKAVKLNPSSSEIMGNGRVSMRKTTKPVPSGSPWYGPDRVKYLGPF
SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPL
GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
LADHLSDPVNNNAWAYATNFVPGK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaacaatggccctctcgtccccttcgctagccggaaaggcggtgaagctc
aacccctcctcctctgagatcatgggcaatggccgtgtctccatgaggaaaaccaccaag
cctgttccctccgggagcccatggtacggaccagaccgtgttaaatacttgggcccgttc
tctggtgagcccccatcctacttgactggtgagttccctggtgactacggctgggacact
gctggcctctctgctgacccagagacctttgccaagaaccgtgagcttgaagtcatccat
tccaggtgggccatgcttggagctcttggatgcgtcttccccgagctcttgtcccgcaac
ggtgtcaagttcggcgaggctgtatggttcaaggctggagcccagatcttcagcgagggt
ggacttgactacttgggcaacccaagcttgatccacgcacaaagcatcttggccatctgg
gctacacaggtggtcttgatgggtgccgttgagggttacagaattgctggcgggccactc
ggtgaggtaactgacccaatctacccaggtggaagcttcgacccactgggcttggctgac
gatcccgaagcattcgctgagttgaaggtgaaggaactcaagaatggtaggttggctatg
ttctcaatgttcggattctttgtccaggccattgtgaccggaaagggaccactggagaac
ctggctgaccacctttctgacccagtaaacaacaacgcctgggcatatgccacaaacttc
gttcccggaaagtga
DBGET
integrated database retrieval system
