Populus trichocarpa (black cottonwood): 7494003
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Entry
7494003 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7494003
KO
K23325
transducin beta-like protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
7494003
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
7494003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Ge1_WD40
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
NBCH_WD40
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
7494003
NCBI-ProteinID:
XP_024450859
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Position
2:11138229..11143542
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AA seq
438 aa
AA seq
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MDQVLPIALISLLLGTAIALIFFKNYFLKRKSEIGSISEPGLHPDLHKKPPKPTHQSRKP
HSKPHSHASSDKDHNKKHHPLDLNTLKGHGDSVSGLCFSYDGRSLATACADGVVRVFKLD
DASSKSFKFLRINVPAGGHPVAVAFSDDASSVVVASQTLSGSSLYMWGEEKVKATDDSKQ
QPKLPLPDIKWEHHKIHEKRAVLTLVGTASTYGSGDGSTIVASCSEGTDIKIWHGKTGKV
LGNVDTNQLKNNMATISPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVPKAMQLKGHKSA
VTWLCFTPDSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLHDSNGATLHYDRL
SLSPDGRILAATHGSMLQWLCVETGKVLDTADNAHNGDITWIAWAPKPMPAGDGRTFVLA
TASVDKKVKLWAAPPLKI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggtcctcccgattgcactcatctcactccttctcggtactgcaatcgctctt
attttcttcaagaactacttcctcaaaagaaaatccgagattggatccatctccgaaccc
ggacttcatccggatcttcataaaaaacctcctaaacctactcaccaatccagaaaacct
cactccaaacctcactcgcatgcctcctccgataaggatcataataagaaacatcatcca
ttggatttgaacactttgaaaggtcacggtgattctgttagcggcctgtgtttctcgtat
gatgggcgcagtttggctaccgcttgtgcagatggagtggtgagggtgtttaaattggat
gatgcttcgagtaaaagtttcaagtttttgagaattaatgtgccagctggaggtcatccg
gtagcagtagcgttttctgatgatgcatcatctgtggtagtagcatcgcaaacactgtct
ggttcgtctttatatatgtggggagaggaaaaggtaaaagctactgatgactctaagcag
caaccaaagcttccgttgcctgatatcaaatgggaacatcacaaaattcatgagaaacgg
gctgttttgaccctggttggaaccgcttctacttatggaagtggtgatggaagtacaatt
gtggcctcttgttcggaaggtactgatatcaaaatttggcatggaaagacaggaaaggtt
ttggggaatgtcgatacaaatcaattgaaaaacaacatggctactatatccccaaatggg
cgtttcattgctgctgcagcttttactgcagatgtgaaggtatgggagattgtgtattca
aaagatggttctgtcaaggaggttcccaaagccatgcaacttaaagggcacaaaagtgca
gtaacatggttatgcttcactccagactcagagcaaatcatcacagcctccaaagatggt
tcgataagaatttggaacatcaatgttcgttatcatcttgatgaggatccaaagacttta
aaggtgtttccgattccacttcatgattcaaatggtgcaactttgcattatgatcgtctc
agtttatcccctgatggaaggatattggctgcaacacatggttcgatgttgcagtggtta
tgtgttgaaactggaaaggttttggacacggctgacaatgcccataatggtgacatcaca
tggattgcatgggcgcctaaacctatgccagcaggtgatggacggaccttcgttttggcc
acggccagcgtggacaagaaagtgaagttatgggcagctccaccgcttaagatatga
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