Populus trichocarpa (black cottonwood): 7494008
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Entry
7494008 CDS
T01077
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7494008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7494008
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
7494008
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
DCB
Sec7-like_HDS
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
7494008
NCBI-ProteinID:
XP_002301298
LinkDB
All DBs
Position
2:11224747..11234841
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AA seq
1783 aa
AA seq
DB search
MASSEADSRLSQVVSPALEKIVKNASWRKHSKLAHECKSVLEILTSRKPQQQHPPTSPSD
DSSSESSLPGPLHDGGSIEYSLAESESILSPLINACNTQFLKIVDPAVDCIQKLIAHGYL
RGEADSTGGTEAKLLAKLIESVCKCYDLGDDGAELLVLKTLLSAVTSISLRIHGDCLLQI
VRTCYDIYLGSKNVINQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPVEKTD
VDGSMAVFVQGFITKIMQDIDGVFNPGTPSKSSMTVAHDGAFETTTGTVESTNPADLLDS
TDKDMLDAKYWEISMYKTALEGRKGELADGEGEREDDLEVQIGNKLRRDAFLVFRALCKL
SMKTPPKEALADPQLMRGKIVALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSS
SSLMIIFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRILENIVQPNFQQKIIVLRFLD
KLCVDSQILVDIFINYDCDINSSNIFERMVNGLLKTAQGALPGTATTLVPPQEVTMKLEA
MKSLVAILKSMGDWMNKQLRIPDPHSAKKSDAAENSPGPGSLPMTNGNGDEPVEGSDSHS
ETSTEASDVSAIEQRRAYKLEFQEGISLFNRKPKKGIEFLINANKVGNSAEEIAAFLKNA
SGLNKTLIGDYLGEREDFSLKVMHAYVDSFDFRGLEFDEAIRVFLQGFRLPGEAQKIDRI
MEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSADDFIRNNRGIDDG
KDLPEEYLRSLFERISKNEIKMKEYDLALQQKQSLNSNRVLGLDSILNIVIRKRGEEKNM
ETSDDLIRHMQEQFKEKARKSESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEV
VIALCLEGIRYAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIAD
EDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNNSEKSKQSKSTILPVLKK
KGPGRMQHAAASVLRGSYDSAGIGGNAAGAVTSEQMNNLVSNLNKLEQVGSSEMNRIFTR
SQKLNSEAIIDFVKALCKVSVEELRSASDPRVFSLTKIVEIAHFNMNRIRLVWSSIWHVL
SDFFVTIGCSENLSIAIFAMDSLRQLSMKFLDREELANYNFQNEFMKPFVIVMRKSNAVE
IRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTAAAYDDHKNIVLLAFEIIEKIIRDYFPY
ITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLQFCATKLAEGDLGSSSRNKDKEVS
VKISSPSPRTGKDGKQENGEIKDKEDHLYFWFPLLAGLSELSFDPRPEVRKSALQVLFET
LRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPPGGNSPEQGIDGDMGELDQDAWLYGT
CTLALQLVVDLFVKFYNTVNPLLRKVLSLLVSFIRRPHQSLAGIGIAAFVRLMSNAGDMF
SEEKWLEVVLSLKDAANATLPDFSYIVSGESSVIADEQNNGETAGSDMPEDESEGLVTHH
LYASISDAKCRAAVQLLLIQAVMEIYSMYRSQLSAKCALVLFDALHEVASHAHSINTNTT
LRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLMMDRPPPFDEAEVESCLVNLCEE
VLQFYVVTACSGQASETSTSGQCLWLIPLGSGKRRELAARAPLIVATLQAICSLGDSSFE
KKLPHFFPLLSSLISCEHGSNEVQVALSDMLSSSVGPVLLRSC
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcggaagccgattcccggttaagccaagtggtatcccctgctttagaaaaa
atcgtcaaaaacgcatcgtggcgtaaacactcgaaattagcacacgaatgcaaatccgtc
ctcgagattctcacttctcgaaaaccccaacaacaacatcctccgacttccccgtcggac
gactcctcatccgaatcctctctccctggcccactccacgacggcgggtccatcgagtac
tccctcgccgaatctgaatctatcctcagccctctgatcaacgcgtgcaacactcaattc
ctcaagatcgtcgatccagccgttgattgcatccagaaattgatcgcgcatgggtaccta
cgtggcgaggcggactccaccggaggtactgaagcgaaattgctagctaagttgattgaa
tctgtgtgtaaatgttatgatttaggggatgatggtgctgaattgctggttttgaaaacc
ctattatcagccgttacgtcgatttcgttgagaattcatggagattgtttgttacaaata
gtgagaacttgttatgacatttatttagggagtaaaaatgtaattaatcaaacgacggcg
aaagcgtctttgattcaaatgttagttattgtgtttaggagaatggaggctgattcttca
acggttccggttcagccgattgttgtggctgaattaatggaaccagtggagaaaacggat
gtcgatggatcaatggcggtgtttgttcaaggttttataacgaaaattatgcaggatata
gatggggtttttaatccggggacacccagtaagtcttcgatgacagtggcacatgatggg
gctttcgagaccactactggtacggtggagagtacaaatccggcagatttgcttgattcg
acggataaggatatgttagatgccaaatattgggaaattagtatgtataagacggctttg
gaaggcaggaaaggggagttggctgatggggaaggggagagggaggatgatttggaagtg
cagattgggaataagttgaggagagatgcatttttggtgtttcgagcactttgtaagtta
tctatgaaaactccgcccaaagaagcattggcggatccacagttgatgagagggaagatt
gttgcattggagttattgaagattttgttggagaatgctggtgctgtgtttaggactagt
gacaggttcttaggtgccatcaagcaatatctatgtctttcactgttgaagaacagctcg
tcaagtcttatgatcattttccagctttcttgctccattttcattagtttggtttcaagg
ttcagagctggactgaaagcagaaattggagtattttttcctatgattgttctcaggatt
cttgaaaatattgttcaacctaattttcagcagaagattatagtacttcggtttctagat
aagctctgtgttgattcccagatcttggtagacatttttattaattatgactgtgatatc
aactcatcaaacatatttgagagaatggtcaatggacttcttaaaactgctcaaggtgcc
ctgcctggtactgccactacactggtgccacctcaggaggtgaccatgaaacttgaagct
atgaagtccttagtggctattctgaaatcaatgggagactggatgaataaacaattgcgc
attcccgatcctcattctgccaagaaatctgatgcagccgaaaacagtcctggacctgga
agtcttcccatgacaaatggtaatggggatgagcctgttgaaggatcagattctcattct
gaaacctcaactgaagcatcggatgtttcagctattgagcaacgacgggcttacaagctg
gaatttcaggaaggtatatctcttttcaatcggaagcctaagaaaggaattgaatttcta
atcaatgcaaataaagtggggaattcagcagaagagatagcagcctttcttaaaaacgca
tctggcttgaacaagactctgattggcgattaccttggggaaagagaagatttttcactg
aaagtaatgcatgcttatgtagattcttttgactttcgcggcctggagttcgatgaggct
atcagagtctttctacagggctttaggttaccaggtgaggcacaaaagattgatcgaatt
atggagaagtttgctgaacgttactgcaaatgtaacccaaaggtttttagcagtgctgac
acagcctatgtccttgcttactccgtgatactgctcaacactgatgctcataatcccatg
gtgaagaataagatgtcagctgatgacttcataagaaacaaccgtggcattgatgatggg
aaagatctacctgaggagtacttgagatctttgtttgaaagaatatcaaaaaatgagatc
aaaatgaaagaatatgatttagctctccaacaaaagcagtctttgaattcaaacagagtt
ttaggcttggatagtatcctgaacattgtgatccgcaagcggggtgaagaaaagaatatg
gaaacaagtgatgatcttatcaggcacatgcaggaacaatttaaagaaaaagctcgaaaa
tctgagtcagtttattatgctgcaacagatgtggtgattcttagattcatgattgaggta
tgctgggctcctatgctggcagccttcagtgtgcctcttgaccaaagtgatgatgaagtg
gtgatagctttgtgtcttgaaggtatccgctatgcaatccatgttactgctgtgatgtcc
atgaagactcatagagatgcttttgtgacttcattagcaaagtttacatcgctccactcc
cctgctgatataaagcagaaaaatattgatgctatcaaggcaatagttacaattgcagat
gaagatgggaattatttgcaagaagcttgggaacatattttgacatgtgtctcacgcttt
gaacatttgcatctcctgggagagggtgctcctccagatgccactttttttgcttttccc
caaaataactctgaaaagtcaaaacaaagcaagtcaaccatcctccctgttctgaaaaag
aagggacccgggaggatgcagcatgcagctgctagtgtgctgagaggttcatatgatagt
gctggtattggtggaaacgctgctggggctgtcacaagtgagcagatgaacaatttagtt
tccaacttaaacaagttagagcaagttggcagctctgagatgaaccgcatcttcacacgg
agccaaaagttaaacagtgaggcaataattgactttgtgaaggctctttgcaaggtttct
gtggaggaattgagatcagcttctgatccacgggtctttagccttacaaagattgttgag
attgcgcactttaacatgaatcgcatcaggcttgtatggtcaagcatctggcatgtgctt
tctgatttctttgtaaccattggctgttctgaaaacctttccattgcaatttttgcaatg
gactctttacgccaattatcaatgaaattcttagaccgagaagagttggcaaactataat
tttcagaatgagtttatgaagccgtttgttattgttatgcggaagagtaatgctgttgaa
atcagagaattgattatcagatgtgtctcgcaaatggtcctgtctcgtgtcaataatgtt
aaatctggatggaagagcatgttcatggttttcacagcagcagcttatgatgaccacaaa
aacattgtactcttggcctttgaaataattgaaaagattattagagattacttcccatac
attacggagactgaaacaaccacctttactgattgtgtgaattgcctgatagcattcacc
aatagtagattcaacaaagacattagccttaatgcaattgcttttcttcaattctgtgcc
acaaaacttgctgaaggagatcttggatcttcatcaaggaacaaagacaaggaagtctct
gtaaaaatttcatccccttcacctcggactggaaaagatggaaaacaagagaatggagaa
atcaaagacaaggaagatcatctttatttctggttccctctgttggctggtttatcagaa
cttagctttgaccctaggcctgaagtcaggaagagtgccttgcaagttctgtttgaaact
ttacgcaatcatggtcatcttttttctctacctttatgggaaagagtctttgagtcggtc
ttatttcctatatttgactatgtgcggcatgctattgatcctcctggaggcaactcccct
gagcaggggattgatggtgatatgggtgaacttgatcaagatgcatggctctatgggaca
tgtaccttggctctccaactggttgtagatctttttgtgaaattctacaatactgtcaat
ccgcttttaagaaaggtgctatcgcttctggttagcttcattaggcgtcctcaccaaagt
cttgctggtattggtattgcggcatttgtgcgtttgatgagcaatgctggagatatgttt
tcagaggagaagtggctggaagtggttttgtcattgaaagatgctgccaatgcaacactc
cctgatttctcttacattgtaagtggagaatcatcggtaatagccgatgaacaaaataat
ggagagactgctggatctgacatgcccgaagatgaatcagagggactggtgacacaccat
ctttatgcttctatatctgatgcaaagtgtcgagctgctgttcaacttctgttgattcag
gcggtgatggagatctatagcatgtaccggtctcaactttcagcaaaatgtgccttggtg
ctctttgatgctttgcatgaggtggcatcccatgctcacagtatcaacacaaatacaaca
ttacgttcaaaactacaagagtttggctctatgacccaaatgcaagaccctccactatta
cgcctggagaatgagtcctatcaaatttgcctcacattcttacaaaatcttatgatggac
agacctccaccttttgatgaagctgaagtggaatcctgccttgtcaacctctgtgaagag
gttttacagttttacgttgtaactgcctgttctggacaggcatcagaaacttctaccagt
ggacaatgcctgtggctgattcctttaggttctggaaaacgaagggaattggctgcacgt
gcacctcttattgttgcaactctccaggccatctgtagtttgggagactcttcgtttgag
aagaaattgcctcatttcttccctcttctttcgagtttgataagttgtgagcatgggtca
aatgaggtccaggtagctctcagtgacatgctcagctcatcagtgggtcctgttttgctt
cggtcttgttga
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integrated database retrieval system
