Populus trichocarpa (black cottonwood): 7494030
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Entry
7494030 CDS
T01077
Name
(RefSeq) phospholipase D beta 2
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00564
Glycerophospholipid metabolism
pop00565
Ether lipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
7494030
00565 Ether lipid metabolism
7494030
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7494030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7494030
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
7494030
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
7494030
Endosome - Golgi transport
Others
Others
7494030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
C2
PLDc_2
Motif
Other DBs
NCBI-GeneID:
7494030
NCBI-ProteinID:
XP_002301317
LinkDB
All DBs
Position
2:11648368..11656599
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AA seq
1147 aa
AA seq
DB search
MDNDHGSPYPYNNPYPYPHHPPPPPPNYGCPPSDPCYPPHPYPPYPPYGAYAYPPPPHSP
SHSGPLDYSHQNPSAPYLTSHSGPLDYSHNPSKPQPTSLSGSLDYSQHQPPSPHPITNSG
PLDFNRHYSGPLATSPYAAYPPVPHVSNSILHNYPFAQPQSSQYPSIDSISQSPSRANSF
SGIHRQDSSSSLGIGSSSSNPDKVDAAVAGTSSAYPPLDDLISNLHLNDTNNHPTAPASL
PAPPVPSVPYSPQSYQGSSFGHAPPHELYGYPNDSFSINWEENYAGKVDSSGHYPASPYA
HSSSFNGSQHGQSMEVVPVSSGKGSSLKVLLLHGNLDICVYDAKNLPNMDIFHKTLGDMF
NKLPGSISSKIEGQVYTKITSDPYVSISVAGAVIGRTFVISNSENPEWTQHFYVPVAHSA
AEVRFVVKDSDVLGSQLIGVVALPVEQIYSGARIEGVYPILNNNGKQCKPGASLRISIQY
MPIEKLGIYQHGVGAGPDYHGVPGTYFPLRKGGTVTLYQDAHVPDGSLPNVQLDNGMPYL
HGKCWQDIFDAIRQARRLIYITGWSVWHKVALVRDGGQHSGVPLGDLLRSKSQEGVRVLL
LLWDDPTSRNVLGYKTDGIMATHDEETRRFFKRSSVQVLLCPRIAGKKHSWVKQREVGTI
YTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDNPDHSLFRTLQTVHKDDYHNPTFT
GSVANCQREPWHDLHSRIDGPAAYDVLTNFEDRWMKAAKPKGLRKLKTSYDDALLRIDRI
PDIIGVFDALSISEDDPEAWHVQIFRSIDSNSVKDFPKDPKDAPKKNLVCGKNVLIDMSI
HTAYVKAIRAAQHFIYIENQYFIGSSYNWGSYKDLGANNLIPMEIALKIANKIRANERFA
AYIIVPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALDEVGLEDAFSSQDFLNFFCL
GNREAVDESNSSGMPTPSSSPIPQALCQKSRRFMIYVHSKGMIVDDEYVILGSANINQRS
MEGTRDTEIAMGAYQPQHTWARKQSNPLGQIHGYRMSLWAEHTGVIEDSFTKPESLECVR
RIRTMGEMNWKQFAAEEVSEMRGHLLKYPVEVDRKGKVRPIPGSETFPDVGGNITGSFLA
IQENLTI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggataatgatcatggctctccatacccttataacaatccatatccataccctcaccat
cctcctcctcctcctccaaattatgggtgtccaccttcagatccatgctatcctcctcat
ccctatcctccataccctccatacggtgcttacgcatatccaccaccaccacactcacca
tcgcattcagggcctttagattattctcaccaaaatccttcagcaccatatctaacaagc
cattcagggcctttagactattcacacaatccttcaaaaccacaaccaactagtctttcg
ggttctttagactattctcaacaccaaccaccatcaccacatccaataacgaattcggga
cctttagattttaatcgccactattctggtcctttagcaacatcaccatatgctgcatat
ccaccagtacctcatgtttcaaattcaatccttcataattacccttttgctcaacctcag
tcgagccaatatccttctattgatagcatttcacaatcgccctctagggctaatagcttt
tccggtattcatagacaagatagttcttcatctttaggaattggatcatcttcatcaaat
cccgataaagttgatgctgctgttgctggtacttcttctgcatatccacctttggatgat
ttaataagtaatttgcatttgaatgatacgaataatcatcctactgcccctgcttcccta
ccagctcctccagtaccttcagtgccttattcccctcaaagctatcagggctctagtttt
ggacatgcccccccacacgaattatatggttatcctaatgactcattttcaattaattgg
gaggagaattatgcgggcaaagttgattcgtctggtcactatcctgcttctccttatgcg
cattcatcctcctttaatggatcacagcatggccaaagtatggaggttgtgccagtgtcg
agtggtaaagggtcgtctttgaaggttttgctcttacacgggaatttggatatttgtgtt
tatgatgcaaagaatctcccaaacatggacattttccacaagactttgggtgatatgttc
aacaaattacctggaagtataagtagcaagattgaaggacaagtgtacaccaagattacc
agcgacccttatgtttcaatttcagtagctggtgctgtgattgggaggacttttgtgatt
agcaatagtgaaaatcctgaatggacgcagcatttttatgttcctgttgcacattccgct
gcagaagtgcgttttgttgttaaagacagtgatgttctggggtcgcagttgataggagtt
gtggcacttccagttgaacagatatattcaggggcaagaattgagggagtttaccctatt
ttgaataacaacggaaaacaatgtaagcctggtgcttctttgagaatttcaattcagtac
atgcccatagagaaactgggcatttatcaacatggtgttggtgctggtcctgattatcat
ggtgtgcctggtacctattttcctcttaggaaaggtggaacagttactctttatcaagat
gcccatgttcctgacgggagccttccaaatgtgcaacttgataacgggatgccttatctg
catggaaagtgctggcaagatatctttgatgctatacgtcaagcccggcgtttaatttac
attaccgggtggtctgtatggcacaaagttgctctggtccgggatggtggtcagcattca
ggtgtgccccttggggatcttctgaggtccaagtcccaggaaggcgtaagagttctgctt
cttctttgggatgatcctacttcaaggaatgtcttgggatataaaacagatggaattatg
gcaacccatgatgaggaaactcgccgctttttcaaacgctcatcagttcaagtgctgctt
tgtcctcgcattgctgggaaaaaacatagctgggtcaagcaaagggaggtcggaacaatt
tatacacatcatcagaaaactgtaattgttgatgctgatgctggcaataatagaagaaaa
atcatagcctttgttggtggacttgatttatgtgatggtcgatatgataatcctgatcac
tctctatttaggacactacaaactgttcacaaagatgactatcacaaccctactttcact
ggtagtgtcgcaaattgccaaagagaaccatggcatgacttgcacagcagaatagatggt
ccagcagcgtatgatgttctaactaactttgaggaccgttggatgaaggctgcaaaacct
aagggccttagaaaactaaaaacatcatatgatgatgctttactcaggattgacagaatt
ccagacattataggtgtttttgatgctctttccattagtgaggatgaccctgaagcttgg
catgttcagatttttcgttcaattgattcaaactctgtgaaagacttcccaaaggatccg
aaggatgccccgaaaaagaacctggtgtgtggaaagaatgtgctcattgacatgagcata
catacagcatatgtgaaggccattcgtgctgcccaacattttatttacatagagaaccag
tattttattgggtcctcgtacaactggggttcatataaagatttaggggctaataatttg
attcctatggaaattgcactaaagattgccaataaaatcagagcgaatgagagatttgct
gcctacattattgttccgatgtggccagagggtgttccaaccggtgctgccacgcaaagg
attttgttttggcagcataaaactatgcaaatgatgtatgagacaatttacaaggcccta
gacgaggttggacttgaggatgcattctcatcacaggattttttgaacttcttctgtctt
ggtaatcgtgaagctgtagatgaatccaactcttcagggatgccaactccttcaagttct
cccattcctcaggcactttgtcagaaaagccggcggttcatgatttatgttcattcgaaa
gggatgatagttgatgatgagtatgtaatactaggatctgcaaacataaatcagcgttca
atggagggcactagagacactgagattgcaatgggagcctaccaacctcaacatacctgg
gcaagaaaacaatctaatccgcttggacagatccatggatatcggatgtctctctgggca
gagcatactggagttattgaggactcctttacaaaacctgagagtcttgaatgtgttagg
agaattagaacaatgggggagatgaactggaaacaatttgctgctgaggaggtttcagag
atgagagggcacctgctaaagtacccggttgaagttgatcgaaagggcaaggtgaggcct
atccctggatctgaaactttcccagatgtcggaggaaatataacgggttcgtttcttgca
attcaggagaatctgactatctaa
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integrated database retrieval system
