Populus trichocarpa (black cottonwood): 7494233
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Entry
7494233 CDS
T01077
Name
(RefSeq) translation initiation factor IF3-1, mitochondrial
KO
K02520
translation initiation factor IF-3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
7494233
03029 Mitochondrial biogenesis [BR:
pop03029
]
7494233
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
MTIFs
7494233
Prokaryotic type
7494233
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
7494233
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF3_N
IF3_C
Motif
Other DBs
NCBI-GeneID:
7494233
NCBI-ProteinID:
XP_002312949
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Position
9:complement(11029455..11033843)
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AA seq
533 aa
AA seq
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MAFWIRTNQSKLIFLSKQLKIYYLQIPYDSSLKYTATSSRSRVLENPVCDFIKKHSEFCN
NVRFFAAPVQAKVNKEEKTLSGPRLNEKITAPVVRLVGDEGHIVLSLREALERAKRLELD
LVEVQRNANPPVCKLLNFNREKYKKELKEKERSKSKAGETLRKGDHKEVRFAAKTEQRDL
EMKADMAKRLMERGYRVKCLVIGSRKKRSMPKVPRDEDPETDFDYEEFERKKEEEELLAL
LSRFISLIEDVSIVDSGPRAGRKMAYAIVRHVKFGSSKKGGGKKDELANARPTDSRSAPP
KSPAMSKEEHAEFYMESEDESADDFDKVFDFSNDAKSPSINHSEGSNSVTEPATSSVEFN
VPKFSHPRSAHDVRNARLPSALPEPSPGKENRYRRSEPGNQFLQTSMDNKGPGKQDSFKF
EPQFSNQRRQPQPQMNATPSTGERKQVSPDFSASRNSKPPHETPKQVASSPETAKPASSY
GIFSSAKAVIPGKQGSVADDSAGNSSLPGSKSDGGVDQGGQKGFGIFSRGRPN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctttttggattagaactaatcagtcaaagctcatttttttgtcaaaacagttgaag
atatactaccttcaaatcccatatgattcttcacttaaatacactgctactagctcaaga
tcacgtgttttagagaatccagtttgtgattttattaaaaagcactctgaattttgcaac
aatgtcaggttttttgctgccccagttcaggccaaagtgaacaaggaagagaagactttg
agtgggccaagattaaatgagaaaatcactgcgccggttgttaggcttgtgggtgatgaa
gggcatattgttctctcattgcgtgaagcactagaacgagcaaaaagacttgaacttgat
ttagttgaggttcaaagaaatgccaatccacctgtctgtaaactcttgaactttaaccga
gagaagtacaaaaaagaactgaaggaaaaggaacgttctaaaagcaaggcaggggaaact
ctgcgcaaaggagatcacaaggaagttcgatttgctgcaaaaactgaacaaagagacttg
gaaatgaaagctgatatggccaaaagactgatggaacgtggctatagggtgaagtgtttg
gtaattggtagtcgaaaaaagcgttcaatgccaaaagttcctagagatgaggatccagag
acggactttgattatgaagagtttgagagaaagaaagaagaggaggagttgctagcactg
ttgtctcgcttcatttctttgattgaagatgtgtctattgtggatagtggaccaagggca
ggaagaaaaatggcatatgcgatagttaggcatgtcaagttcggctcatcaaagaaaggt
ggtggtaaaaaggacgagttagccaatgcgcggccaacagacagtcgatctgctcctccc
aagagccctgcgatgtctaaggaagagcatgcagaattttacatggaatctgaagatgag
tcagccgatgattttgacaaggtgtttgatttcagcaatgatgcaaagagtcctagtata
aatcattcagagggaagtaattctgttacagaaccagctacctccagtgtagagtttaat
gttccgaagttctctcatccaagatcagcacatgatgtaaggaatgcaagacttccttcg
gccctaccagagccttccccggggaaggaaaataggtatagaagaagtgaaccggggaat
cagttcctacaaacgtcaatggataataaaggcccaggtaagcaggactcattcaagttt
gaaccacagttctcgaaccaaagaaggcaaccacaaccacagatgaatgccactccatca
acgggagaaaggaagcaggttagccctgatttttctgcttctagaaactcaaagcctcct
catgaaacacccaagcaagttgcttcttctccagagactgcaaaacctgcatctagctat
ggaatatttagctctgcaaaagctgttattcccgggaaacaaggctctgtagcagacgat
tcagctggaaattctagcctcccaggttcaaaatcagatggtggcgttgatcagggtgga
cagaagggatttgggattttcagtcgaggcaggccaaattga
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